75893

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 3227718..3228079 Replicon chromosome
Accession NZ_CP021015
Organism Xanthomonas citri pv. phaseoli var. fuscans strain CFBP6991

Toxin (Protein)


Gene name EcnB Uniprot ID M4UGA1
Locus tag XcfCFBP6991P_RS14570 Protein ID WP_005914328.1
Coordinates 3227945..3228079 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID H8FG64
Locus tag XcfCFBP6991P_RS14565 Protein ID WP_003486606.1
Coordinates 3227718..3227870 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XcfCFBP6991P_RS14535 3222772..3223455 - 684 WP_007966938.1 dTMP kinase -
XcfCFBP6991P_RS14540 3223939..3224481 - 543 WP_003486615.1 GTPase -
XcfCFBP6991P_RS14545 3224478..3225395 - 918 WP_007966939.1 hypothetical protein -
XcfCFBP6991P_RS14550 3225492..3225851 - 360 WP_003486613.1 hypothetical protein -
XcfCFBP6991P_RS14555 3225915..3226367 - 453 WP_007974175.1 roadblock/LC7 domain-containing protein -
XcfCFBP6991P_RS14560 3226688..3227611 + 924 WP_007966941.1 arginase -
XcfCFBP6991P_RS14565 3227718..3227870 + 153 WP_003486606.1 entericidin A/B family lipoprotein Antitoxin
XcfCFBP6991P_RS14570 3227945..3228079 + 135 WP_005914328.1 entericidin A/B family lipoprotein Toxin
XcfCFBP6991P_RS14575 3228306..3228515 + 210 WP_016904514.1 CsbD family protein -
XcfCFBP6991P_RS14580 3228688..3229977 + 1290 WP_007966942.1 tryptophan--tRNA ligase -
XcfCFBP6991P_RS14585 3230007..3231050 + 1044 WP_099802478.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4459.32 Da        Isoelectric Point: 9.3487

>T75893 WP_005914328.1 NZ_CP021015:3227945-3228079 [Xanthomonas citri pv. phaseoli var. fuscans]
MKRAIVLLVLSMLSVGMLAGCNTVAGAGKDVQGAGEKVEDAARK

Download         Length: 135 bp

>T75893 NZ_CP021015:3227945-3228079 [Xanthomonas citri pv. phaseoli var. fuscans]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCGATGTTGTCGGTGGGAATGCTGGCGGGTTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGCAGGGCGCTGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5122.07 Da        Isoelectric Point: 8.7942

>AT75893 WP_003486606.1 NZ_CP021015:3227718-3227870 [Xanthomonas citri pv. phaseoli var. fuscans]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDMQGAGNKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT75893 NZ_CP021015:3227718-3227870 [Xanthomonas citri pv. phaseoli var. fuscans]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCCGGCGC
CGGCAAGGACATGCAGGGTGCGGGTAACAAGGTCGAGAAAACGGCCGAAAAATGCAGCGACGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A3G2W7U6

Antitoxin

Source ID Structure
AlphaFold DB A0A828YLX6

References