75641

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /Acetyltransf_4(toxin)
Location 1658832..1660251 Replicon chromosome
Accession NZ_CP020892
Organism Pseudomonas sp. M30-35

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag B9K09_RS07765 Protein ID WP_087516268.1
Coordinates 1658832..1659404 (+) Length 191 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag B9K09_RS07770 Protein ID WP_087516269.1
Coordinates 1659409..1660251 (+) Length 281 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B9K09_RS07760 1655072..1658548 - 3477 WP_087516267.1 hybrid sensor histidine kinase/response regulator -
B9K09_RS07765 1658832..1659404 + 573 WP_087516268.1 GNAT family N-acetyltransferase Toxin
B9K09_RS07770 1659409..1660251 + 843 WP_087516269.1 AraC family transcriptional regulator Antitoxin
B9K09_RS07775 1660340..1661050 + 711 WP_087516270.1 AzlC family ABC transporter permease -
B9K09_RS07780 1661050..1661379 + 330 WP_087516271.1 AzlD domain-containing protein -
B9K09_RS07785 1661633..1663507 + 1875 WP_087516272.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
B9K09_RS07790 1663563..1663877 - 315 WP_087516273.1 quaternary ammonium compound efflux SMR transporter SugE -
B9K09_RS07795 1664020..1664967 - 948 WP_087516274.1 bile acid:sodium symporter family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

GNAT domain

(14-147)

Antitoxin

AraC-type arabinose-binding/dimerisation domain

(17-136)


Sequences

Toxin        


Download         Length: 191 a.a.        Molecular weight: 21787.11 Da        Isoelectric Point: 10.2517

>T75641 WP_087516268.1 NZ_CP020892:1658832-1659404 [Pseudomonas sp. M30-35]
MFKPQLITLQRGALRIEPMVDADIPGLVTLAEANRRELVYVDGAQRLDWYRQGLAEQREGKALPFTIRLSDQLVGTTRFA
DFMPKLPATEIGWTWLDQTQHGTGLNSMIKYLMLRHAFENWRMVRVQLKTAASNLRSQAAIEKLGAEREGLLRNHRRLAD
GRLDDTVLYSVTDRQWPAIKQQLEARFGAL

Download         Length: 573 bp

>T75641 NZ_CP020892:1658832-1659404 [Pseudomonas sp. M30-35]
ATGTTCAAGCCGCAATTAATAACCCTGCAGCGCGGCGCTCTGCGCATTGAACCCATGGTTGATGCGGACATTCCTGGGCT
GGTCACTCTGGCTGAGGCCAATCGCCGCGAGCTGGTCTATGTTGATGGCGCGCAACGTCTGGATTGGTATCGTCAGGGCC
TGGCAGAGCAGCGTGAGGGTAAAGCCTTGCCGTTTACAATCCGCCTGAGCGACCAACTGGTAGGGACCACGCGTTTTGCT
GACTTTATGCCCAAGCTGCCCGCCACTGAAATCGGCTGGACCTGGCTTGATCAAACCCAGCATGGCACCGGGCTGAACAG
CATGATCAAGTACCTGATGCTACGTCATGCATTTGAAAACTGGCGCATGGTCCGCGTGCAGCTAAAAACCGCTGCGAGCA
ACCTGCGCTCACAAGCCGCCATTGAAAAACTCGGCGCTGAGCGTGAGGGATTACTGCGTAATCATCGGCGACTCGCAGAT
GGGCGCTTGGATGATACGGTGCTATACAGCGTTACTGATCGGCAGTGGCCGGCGATTAAACAGCAGTTGGAGGCGCGATT
CGGCGCGTTGTGA

Antitoxin


Download         Length: 281 a.a.        Molecular weight: 31215.75 Da        Isoelectric Point: 10.3209

>AT75641 WP_087516269.1 NZ_CP020892:1659409-1660251 [Pseudomonas sp. M30-35]
MGEAREQTRFWQAKGLADVELLHARYVQQRFVPHVHEGFVFTVIQNGAQQFRHRGSDHLAPQGSMVLINPDEVHTGSKAH
DDGWRYRAFYPDNRQVLGVLQELDLAGGGLPSFAVSVLHDPQLHAAFTRLHLLLEGGADVLQQQIVWREAVLLLFQRYAK
VAEPRAPGRETRAVEQAKELLSTQLAAPPSLEALAAAVNLSPFHFARVFRRATGLPPHAWLKQRRLSQARAMLKQGCMPL
QVAMQLGFADQSHMSRQFKQVFGVAPGVYRAASSGLASWP

Download         Length: 843 bp

>AT75641 NZ_CP020892:1659409-1660251 [Pseudomonas sp. M30-35]
ATGGGCGAGGCGCGTGAACAAACCCGTTTTTGGCAGGCCAAGGGTCTTGCCGATGTCGAACTACTGCATGCACGTTATGT
ACAGCAGCGCTTTGTTCCGCATGTGCATGAAGGATTTGTCTTTACCGTCATCCAAAACGGTGCCCAGCAGTTCAGGCACC
GAGGCAGTGACCATTTAGCGCCGCAAGGCAGCATGGTGCTGATCAACCCGGATGAGGTTCACACGGGGTCCAAGGCGCAT
GACGATGGCTGGCGTTATCGAGCTTTTTATCCCGATAACCGCCAAGTGCTTGGGGTGTTGCAAGAGCTTGATTTAGCGGG
CGGCGGGCTGCCGAGCTTTGCCGTTAGCGTGCTCCATGACCCGCAATTGCACGCAGCATTCACTCGTTTGCATCTTTTGC
TCGAAGGCGGCGCTGATGTTTTGCAGCAGCAAATCGTCTGGCGTGAAGCCGTCTTACTGTTGTTCCAGCGTTATGCCAAA
GTGGCTGAACCGCGTGCGCCCGGCCGTGAGACGCGCGCGGTGGAGCAGGCCAAGGAATTGCTCAGCACTCAACTGGCTGC
GCCGCCGTCACTCGAAGCTTTGGCGGCTGCGGTGAATCTCTCGCCATTTCATTTCGCTCGGGTATTCCGCCGCGCAACGG
GCTTGCCGCCGCATGCCTGGTTGAAACAGCGGCGTTTAAGCCAGGCCCGCGCCATGCTCAAGCAAGGTTGCATGCCGTTG
CAAGTAGCGATGCAGCTTGGCTTTGCTGATCAGAGTCATATGAGTCGCCAATTCAAACAGGTTTTCGGCGTTGCTCCCGG
TGTTTATCGGGCTGCAAGTTCGGGGCTGGCAAGCTGGCCATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References