Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pemIK/MazF-MazE
Location 1081238..1081812 Replicon chromosome
Accession NZ_CP020773
Organism Staphylococcus lutrae strain ATCC 700373

Toxin (Protein)


Gene name pemK Uniprot ID -
Locus tag B5P37_RS05075 Protein ID WP_085237212.1
Coordinates 1081480..1081812 (+) Length 111 a.a.

Antitoxin (Protein)


Gene name pemI Uniprot ID -
Locus tag B5P37_RS05070 Protein ID WP_206168701.1
Coordinates 1081238..1081486 (+) Length 83 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(3-105)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 111 a.a.        Molecular weight: 12530.67 Da        Isoelectric Point: 10.3812

>T75413 WP_085237212.1 NZ_CP020773:1081480-1081812 [Staphylococcus lutrae]
MVKQFDIVMIDLDPTRGKEKQKYRPCVIVSNNFVNQGSPFVWALPITNRTKRFPSDIVVKTKHNSITGIIDSLQIRALDI
KARNNKIVDELDESIKSDVIKTIIAHSKII

Download         Length: 333 bp

>T75413 NZ_CP020773:1081480-1081812 [Staphylococcus lutrae]
ATGGTAAAACAATTCGACATTGTAATGATTGATTTAGATCCTACTCGAGGTAAAGAAAAACAAAAATACCGACCGTGTGT
AATTGTAAGCAACAATTTTGTCAATCAAGGCTCGCCTTTTGTTTGGGCTTTACCTATAACTAACAGAACCAAGAGGTTTC
CTTCAGATATAGTTGTTAAAACAAAACATAATAGCATAACAGGTATCATTGATTCGCTGCAAATAAGAGCTTTAGATATT
AAAGCCAGAAATAATAAAATTGTAGATGAATTAGATGAGAGTATCAAGTCTGACGTCATCAAGACTATCATTGCACACTC
TAAAATAATTTAA

Antitoxin


Download         Length: 83 a.a.        Molecular weight: 9226.36 Da        Isoelectric Point: 5.0893

>AT75413 WP_206168701.1 NZ_CP020773:1081238-1081486 [Staphylococcus lutrae]
MKMLSKVIKNGNSQAISLNKSILNEAGLNIGDSLNVEISEGAVKFTKREKSIINEIHDFYRNGGHYDEKEIDFGDQVGQE
LW

Download         Length: 249 bp

>AT75413 NZ_CP020773:1081238-1081486 [Staphylococcus lutrae]
ATGAAAATGTTATCAAAAGTTATAAAAAATGGAAATAGCCAAGCAATCAGTTTAAATAAATCCATCTTAAACGAAGCAGG
TTTAAACATTGGGGATTCTTTAAATGTAGAAATAAGCGAGGGCGCAGTTAAGTTTACCAAAAGAGAAAAGTCAATTATAA
ATGAAATTCATGATTTTTATCGTAATGGGGGTCACTATGATGAAAAAGAAATTGATTTTGGCGATCAAGTAGGTCAAGAA
CTATGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References