Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) PumAB/upstrm_HI1419-dnstrm_HI1420
Location 3434895..3435482 Replicon chromosome
Accession NZ_CP020384
Organism Rhodovulum sp. MB263

Toxin (Protein)


Gene name PumA Uniprot ID -
Locus tag B5V46_RS15900 Protein ID WP_080617504.1
Coordinates 3434895..3435185 (+) Length 97 a.a.

Antitoxin (Protein)


Gene name PumB Uniprot ID -
Locus tag B5V46_RS15905 Protein ID WP_080617505.1
Coordinates 3435195..3435482 (+) Length 96 a.a.

Genomic Context

B5V46_RS15900B5V46_RS15905B5V46_RS15910B5V46_RS15915B5V46_RS15940B5V46_RS15945B5V46_RS15950B5V46_RS15880B5V46_RS15885B5V46_RS15890B5V46_RS15895B5V46_RS15920B5V46_RS15925B5V46_RS15930B5V46_RS15935B5V46_RS19945
Location: 3434895..3435185 (291 bp)
Type: Toxin
Protein ID: WP_080617504.1
Location: 3435195..3435482 (288 bp)
Type: Antitoxin
Protein ID: WP_080617505.1
Location: 3435629..3435901 (273 bp)
Type: Others
Protein ID: WP_080617506.1
Location: 3435882..3436103 (222 bp)
Type: Others
Protein ID: WP_155774098.1
Location: 3438621..3438917 (297 bp)
Type: Others
Protein ID: WP_155774100.1
Location: 3438914..3439270 (357 bp)
Type: Others
Protein ID: WP_080617513.1
Location: 3439267..3439530 (264 bp)
Type: Others
Protein ID: WP_080617514.1
Location: 3431563..3432318 (756 bp)
Type: Others
Protein ID: WP_196774271.1
Location: 3432323..3432556 (234 bp)
Type: Others
Protein ID: WP_080617503.1
Location: 3432556..3433812 (1257 bp)
Type: Others
Protein ID: WP_196774272.1
Location: 3433908..3434417 (510 bp)
Type: Others
Protein ID: WP_060836213.1
Location: 3436116..3436754 (639 bp)
Type: Others
Protein ID: WP_080617508.1
Location: 3436765..3437409 (645 bp)
Type: Others
Protein ID: WP_080617509.1
Location: 3437420..3437893 (474 bp)
Type: Others
Protein ID: WP_080617510.1
Location: 3437893..3438441 (549 bp)
Type: Others
Protein ID: WP_080617511.1
Location: 3438461..3438622 (162 bp)
Type: Others
Protein ID: WP_155774099.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
B5V46_RS158803431563..3432318-756WP_196774271.1DUF1073 domain-containing protein-
B5V46_RS158853432323..3432556-234WP_080617503.1hypothetical protein-
B5V46_RS158903432556..3433812-1257WP_196774272.1phage terminase large subunit-
B5V46_RS158953433908..3434417-510WP_060836213.1terminase small subunit-
B5V46_RS159003434895..3435185+291WP_080617504.1type II toxin-antitoxin system RelE/ParE family toxinToxin
B5V46_RS159053435195..3435482+288WP_080617505.1putative addiction module antidote proteinAntitoxin
B5V46_RS159103435629..3435901+273WP_080617506.1BrnT family toxin-
B5V46_RS159153435882..3436103+222WP_155774098.1BrnA antitoxin family protein-
B5V46_RS159203436116..3436754-639WP_080617508.1hypothetical protein-
B5V46_RS159253436765..3437409-645WP_080617509.1hypothetical protein-
B5V46_RS159303437420..3437893-474WP_080617510.1single-stranded DNA-binding protein-
B5V46_RS159353437893..3438441-549WP_080617511.1hypothetical protein-
B5V46_RS199453438461..3438622-162WP_155774099.1hypothetical protein-
B5V46_RS159403438621..3438917+297WP_155774100.1hypothetical protein-
B5V46_RS159453438914..3439270+357WP_080617513.1hypothetical protein-
B5V46_RS159503439267..3439530+264WP_080617514.1DUF2312 domain-containing protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideProphage--3421482..344302121539


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Addiction module killer protein, predicted

(3-95)

Antitoxin

Uncharacterized protein HI1420

(4-95)


Sequences

Toxin        


Download         Length: 97 a.a.        Molecular weight: 10925.69 Da        Isoelectric Point: 10.0301

>T74557 WP_080617504.1 NZ_CP020384:3434895-3435185 [Rhodovulum sp. MB263]
MSYEIHQSAEFSKWLRKLKDRTAQARIAIRIARLEAGLMGDAKFFDGIGELRITYGPGYRVYFVQQGETIIILLCGGDKG
SQRRDIEKAKTMAKEI

Download         Length: 291 bp

>T74557 NZ_CP020384:3434895-3435185 [Rhodovulum sp. MB263]
ATGAGTTACGAAATTCACCAGTCCGCCGAGTTCTCGAAATGGCTTCGCAAGCTGAAAGACCGCACGGCGCAAGCCCGCAT
CGCGATCAGGATCGCCCGGCTTGAAGCTGGCCTCATGGGCGACGCCAAGTTCTTCGACGGCATTGGTGAACTTCGGATCA
CCTACGGCCCGGGATACCGCGTCTACTTCGTCCAGCAGGGCGAGACGATCATCATCCTGCTCTGCGGAGGCGACAAAGGC
TCCCAGCGCAGGGACATCGAAAAGGCCAAGACCATGGCCAAGGAAATTTAG

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10023.46 Da        Isoelectric Point: 5.6939

>AT74557 WP_080617505.1 NZ_CP020384:3435195-3435482 [Rhodovulum sp. MB263]
MPIETTRFDAAEYLDTPEAQAMLLSDAFETGDAAYIKHAIGIVARARGIKDTAEAAGITREALHRALGEKGNPRLSTILG
VTKALGLTLKVEASA

Download         Length: 288 bp

>AT74557 NZ_CP020384:3435195-3435482 [Rhodovulum sp. MB263]
ATGCCTATCGAAACCACGCGCTTCGACGCGGCCGAATATCTCGACACGCCGGAAGCGCAAGCGATGCTGCTCTCCGACGC
CTTCGAGACGGGTGACGCCGCCTACATCAAGCACGCCATCGGGATCGTCGCCAGGGCGCGCGGGATCAAGGACACGGCCG
AGGCCGCCGGGATCACCCGGGAGGCGCTGCACCGCGCCTTGGGTGAGAAGGGAAACCCGAGGCTGTCTACTATCCTCGGC
GTGACGAAGGCGCTTGGGCTGACCTTGAAGGTCGAGGCGTCGGCCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References