74388

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) vapBC/HTH_10(toxin)
Location 1945964..1946946 Replicon chromosome
Accession NZ_CP020360
Organism Sulfolobus acidocaldarius strain Y14 18-5

Toxin (Protein)


Gene name vapC Uniprot ID M1IXW8
Locus tag B6A18_RS10605 Protein ID WP_011278959.1
Coordinates 1946326..1946946 (+) Length 207 a.a.

Antitoxin (Protein)


Gene name vapB Uniprot ID M1I813
Locus tag B6A18_RS10600 Protein ID WP_011278958.1
Coordinates 1945964..1946314 (+) Length 117 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
B6A18_RS10580 1941368..1943302 - 1935 WP_011278954.1 DUF2079 domain-containing protein -
B6A18_RS10585 1943511..1944215 + 705 WP_011278955.1 zinc ribbon domain-containing protein -
B6A18_RS10590 1944299..1944943 - 645 WP_011278956.1 2,5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase -
B6A18_RS10595 1944990..1945685 - 696 WP_011278957.1 glycerophosphodiester phosphodiesterase -
B6A18_RS10600 1945964..1946314 + 351 WP_011278958.1 DUF488 family protein Antitoxin
B6A18_RS10605 1946326..1946946 + 621 WP_011278959.1 helix-turn-helix domain-containing protein Toxin
B6A18_RS10610 1947051..1948457 - 1407 WP_015385784.1 amidase -
B6A18_RS10615 1948661..1949110 + 450 WP_230937910.1 hypothetical protein -
B6A18_RS10620 1949200..1950846 - 1647 WP_011278962.1 thermopsin family protease -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(147-197)

Antitoxin

(3-108)


Sequences


Toxin        


Download         Length: 207 a.a.        Molecular weight: 23490.89 Da        Isoelectric Point: 9.6857

>T74388 WP_011278959.1 NZ_CP020360:1946326-1946946 [Sulfolobus acidocaldarius]
MGAGDVKKPINVTLILQNHPCLVMKLFEEMNVKAEINNVKMRESVTDHIATLKLTEKLLKELKERRSKTLRISENSVWIR
TEGCQVCKILYVSDAVVEKVKVVGSDAVMYKLIVPNLLSLKSLIDELNKIGVKAMVGSISELDEEQLTERQLEILKLSYK
MGFFDVDRRITMTELAEKLGIKAPTLEEILRRALRKAVKYYLDKKG

Download         Length: 621 bp

>T74388 NZ_CP020360:1946326-1946946 [Sulfolobus acidocaldarius]
ATGGGTGCTGGTGATGTAAAGAAACCTATAAATGTTACACTTATTCTACAGAATCACCCCTGCTTAGTTATGAAATTATT
TGAAGAGATGAATGTAAAGGCGGAAATTAACAATGTGAAGATGAGGGAAAGTGTTACTGACCACATTGCAACCTTAAAGT
TAACTGAAAAGTTGCTTAAGGAGTTGAAAGAAAGAAGGTCAAAAACCTTGAGGATAAGTGAAAATAGCGTCTGGATCAGG
ACTGAAGGTTGCCAGGTATGTAAAATCCTTTATGTAAGTGACGCTGTAGTTGAGAAAGTGAAAGTTGTAGGAAGTGATGC
AGTTATGTATAAACTAATTGTTCCAAATCTACTCTCTCTGAAGAGTCTTATAGATGAGCTCAACAAGATAGGTGTAAAGG
CTATGGTAGGTAGCATATCTGAGCTAGATGAAGAGCAACTGACAGAAAGGCAATTGGAGATATTGAAATTATCATATAAG
ATGGGTTTCTTTGATGTAGACAGAAGAATAACCATGACGGAATTAGCTGAAAAACTTGGGATCAAGGCTCCTACTTTGGA
AGAGATACTGAGAAGGGCTCTACGAAAGGCAGTTAAGTATTATCTAGATAAAAAAGGATAA

Antitoxin


Download         Length: 117 a.a.        Molecular weight: 13918.19 Da        Isoelectric Point: 8.2649

>AT74388 WP_011278958.1 NZ_CP020360:1945964-1946314 [Sulfolobus acidocaldarius]
MIKIKNVYDKPEINDGIRILVERTWPASVTRGSIDMWLRDLAPSEELITWYNYEPQKWEEFKRRYLEELRYNPKVKPLLM
IVKMTKIVTFLYSGDPTYNNAVVLKEYIESLINKES

Download         Length: 351 bp

>AT74388 NZ_CP020360:1945964-1946314 [Sulfolobus acidocaldarius]
ATGATAAAAATAAAAAACGTTTATGACAAACCAGAGATTAACGACGGGATTAGAATATTGGTCGAGAGGACATGGCCAGC
CTCTGTAACTAGAGGCTCTATCGATATGTGGCTTAGGGATCTTGCCCCTTCTGAAGAATTAATAACATGGTATAATTATG
AACCGCAAAAATGGGAGGAATTTAAGAGAAGATATCTAGAAGAGTTGAGGTACAATCCAAAAGTTAAACCTTTATTGATG
ATAGTTAAGATGACTAAGATCGTAACATTTCTATACTCAGGAGACCCCACATACAATAACGCAGTTGTGCTCAAAGAATA
CATAGAAAGTTTAATAAATAAGGAAAGTTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB M1IXW8


Antitoxin

Source ID Structure
AlphaFold DB M1I813

References