Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /RES-TIGR02293 |
Location | 1730547..1731460 | Replicon | chromosome |
Accession | NZ_CP020089 | ||
Organism | Enterobacter cloacae strain PIMB10EC27 |
Toxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | B2J95_RS08435 | Protein ID | WP_058679276.1 |
Coordinates | 1730547..1731020 (-) | Length | 158 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | B2J95_RS08440 | Protein ID | WP_038981400.1 |
Coordinates | 1731017..1731460 (-) | Length | 148 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
B2J95_RS08415 | 1726705..1728015 | + | 1311 | WP_058679280.1 | type I-F CRISPR-associated protein Csy1 | - |
B2J95_RS08420 | 1728012..1728947 | + | 936 | WP_058679279.1 | type I-F CRISPR-associated protein Csy2 | - |
B2J95_RS08425 | 1728961..1729959 | + | 999 | WP_058679278.1 | type I-F CRISPR-associated protein Csy3 | - |
B2J95_RS08430 | 1729970..1730524 | + | 555 | WP_058679277.1 | type I-F CRISPR-associated endoribonuclease Cas6/Csy4 | - |
B2J95_RS08435 | 1730547..1731020 | - | 474 | WP_058679276.1 | RES domain-containing protein | Toxin |
B2J95_RS08440 | 1731017..1731460 | - | 444 | WP_038981400.1 | DUF2384 domain-containing protein | Antitoxin |
B2J95_RS08445 | 1731765..1731983 | - | 219 | WP_002211347.1 | translation initiation factor IF-1 | - |
B2J95_RS08450 | 1732268..1732972 | - | 705 | WP_013097324.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
B2J95_RS08455 | 1733018..1734739 | - | 1722 | WP_058679275.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 158 a.a. Molecular weight: 17721.99 Da Isoelectric Point: 4.7156
>T74032 WP_058679276.1 NZ_CP020089:c1731020-1730547 [Enterobacter cloacae]
MIFYRLVTGRYASEAWSGGGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVKKDTVLNQYQLFSIDIPEEQIEYLDKA
WLPEDWQEDPAPMSTMDLGTGWLQSSSALALILPSCIIPYENNAILNPLHPDFHQRLETVQQLPFSFDNRLAEKTAS
MIFYRLVTGRYASEAWSGGGANQYGGRWNHKGHPAVYVSTSISLASLEILVHVKKDTVLNQYQLFSIDIPEEQIEYLDKA
WLPEDWQEDPAPMSTMDLGTGWLQSSSALALILPSCIIPYENNAILNPLHPDFHQRLETVQQLPFSFDNRLAEKTAS
Download Length: 474 bp
>T74032 NZ_CP020089:c1731020-1730547 [Enterobacter cloacae]
ATGATTTTTTATCGTCTGGTGACAGGACGATATGCCAGCGAAGCGTGGAGTGGAGGCGGCGCAAACCAGTATGGCGGCCG
CTGGAATCACAAAGGACACCCGGCGGTATACGTCTCTACATCCATCTCGCTGGCATCACTTGAAATTCTGGTTCACGTTA
AAAAAGATACCGTGTTAAACCAATACCAGCTTTTCAGCATTGATATCCCGGAAGAGCAAATTGAGTATCTGGATAAAGCA
TGGCTACCCGAAGACTGGCAGGAGGATCCTGCACCGATGTCGACAATGGATCTGGGAACCGGTTGGCTCCAGTCCAGCAG
CGCGCTGGCGCTTATTCTACCGTCCTGCATCATTCCTTATGAAAATAACGCCATACTTAATCCACTGCATCCCGATTTTC
ATCAGAGACTGGAGACCGTCCAGCAACTCCCTTTTAGCTTTGATAACCGGCTAGCAGAAAAAACCGCATCCTGA
ATGATTTTTTATCGTCTGGTGACAGGACGATATGCCAGCGAAGCGTGGAGTGGAGGCGGCGCAAACCAGTATGGCGGCCG
CTGGAATCACAAAGGACACCCGGCGGTATACGTCTCTACATCCATCTCGCTGGCATCACTTGAAATTCTGGTTCACGTTA
AAAAAGATACCGTGTTAAACCAATACCAGCTTTTCAGCATTGATATCCCGGAAGAGCAAATTGAGTATCTGGATAAAGCA
TGGCTACCCGAAGACTGGCAGGAGGATCCTGCACCGATGTCGACAATGGATCTGGGAACCGGTTGGCTCCAGTCCAGCAG
CGCGCTGGCGCTTATTCTACCGTCCTGCATCATTCCTTATGAAAATAACGCCATACTTAATCCACTGCATCCCGATTTTC
ATCAGAGACTGGAGACCGTCCAGCAACTCCCTTTTAGCTTTGATAACCGGCTAGCAGAAAAAACCGCATCCTGA
Antitoxin
Download Length: 148 a.a. Molecular weight: 16234.50 Da Isoelectric Point: 6.4772
>AT74032 WP_038981400.1 NZ_CP020089:c1731460-1731017 [Enterobacter cloacae]
MRTWVPAQKPADNALWRYAGLPANRGMQLIELLSQGLPVSVLDNIHEWTAMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDAAVDYFGSKDDAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
MRTWVPAQKPADNALWRYAGLPANRGMQLIELLSQGLPVSVLDNIHEWTAMSKADILRVTGINERNVARRKSAGRTLTPD
ESERVARFVRVLDAAVDYFGSKDDAWNWLQSPVRGLGNVAPVDLIATETGALEVTDLIGRLEHGVFA
Download Length: 444 bp
>AT74032 NZ_CP020089:c1731460-1731017 [Enterobacter cloacae]
ATGAGAACATGGGTTCCTGCGCAGAAGCCTGCTGATAACGCACTTTGGCGCTATGCCGGTTTACCTGCAAATCGAGGTAT
GCAGCTGATTGAGCTTCTTAGTCAGGGTCTACCCGTTAGCGTACTCGACAACATTCATGAATGGACGGCGATGTCAAAAG
CAGACATTTTGCGCGTCACCGGGATAAACGAGCGCAATGTCGCGCGTCGTAAAAGTGCGGGTCGTACATTGACCCCCGAT
GAAAGTGAGCGCGTGGCGCGCTTCGTACGCGTTCTGGATGCTGCCGTTGATTATTTTGGCAGTAAAGATGATGCATGGAA
CTGGCTACAATCACCAGTCCGTGGACTCGGAAATGTTGCGCCTGTCGATTTGATTGCAACAGAAACCGGTGCACTGGAAG
TGACCGATTTGATTGGTCGCCTGGAACATGGAGTATTCGCATGA
ATGAGAACATGGGTTCCTGCGCAGAAGCCTGCTGATAACGCACTTTGGCGCTATGCCGGTTTACCTGCAAATCGAGGTAT
GCAGCTGATTGAGCTTCTTAGTCAGGGTCTACCCGTTAGCGTACTCGACAACATTCATGAATGGACGGCGATGTCAAAAG
CAGACATTTTGCGCGTCACCGGGATAAACGAGCGCAATGTCGCGCGTCGTAAAAGTGCGGGTCGTACATTGACCCCCGAT
GAAAGTGAGCGCGTGGCGCGCTTCGTACGCGTTCTGGATGCTGCCGTTGATTATTTTGGCAGTAAAGATGATGCATGGAA
CTGGCTACAATCACCAGTCCGTGGACTCGGAAATGTTGCGCCTGTCGATTTGATTGCAACAGAAACCGGTGCACTGGAAG
TGACCGATTTGATTGGTCGCCTGGAACATGGAGTATTCGCATGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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