Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 1077422..1078341 Replicon chromosome
Accession NZ_CP019683
Organism Campylobacter sputorum bv. faecalis CCUG 20703

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag CSF_RS05365 Protein ID WP_089188301.1
Coordinates 1077658..1078341 (+) Length 228 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag CSF_RS05360 Protein ID WP_089188300.1
Coordinates 1077422..1077661 (+) Length 80 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
CSF_RS05330 1073412..1074185 - 774 WP_089188296.1 5-oxoprolinase subunit PxpA -
CSF_RS05335 1074496..1075191 + 696 WP_089188297.1 ABC transporter permease -
CSF_RS05340 1075335..1076024 + 690 WP_089188298.1 TVP38/TMEM64 family protein -
CSF_RS05345 1075990..1076619 + 630 WP_089182653.1 TVP38/TMEM64 family protein -
CSF_RS05350 1076864..1077100 + 237 WP_089188299.1 hypothetical protein -
CSF_RS05360 1077422..1077661 + 240 WP_089188300.1 hypothetical protein Antitoxin
CSF_RS05365 1077658..1078341 + 684 WP_089188301.1 Fic family protein Toxin
CSF_RS05370 1078345..1078555 + 211 Protein_1044 hypothetical protein -
CSF_RS05375 1078734..1079120 + 387 WP_089182655.1 rhodanese-like domain-containing protein -
CSF_RS05380 1079117..1080565 + 1449 WP_089188302.1 TIGR04282 family arsenosugar biosynthesis glycosyltransferase -
CSF_RS05385 1080550..1081206 + 657 WP_089188303.1 TIGR04283 family arsenosugar biosynthesis glycosyltransferase -
CSF_RS05390 1081193..1082164 + 972 WP_089182658.1 (Fe-S)-binding protein -
CSF_RS05395 1082215..1083075 + 861 WP_089188780.1 arsenosugar biosynthesis radical SAM protein ArsS -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(60-164)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 228 a.a.        Molecular weight: 26406.52 Da        Isoelectric Point: 9.9669

>T73159 WP_089188301.1 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
VIDKILNFMNNGIPKNDFDRQLLASNLVGAKNLKELNRLERIITIQKINDLDINPIKGNFDYQHLKNIHKFIFEYVYVFA
GFDRADIGLQGAFLKGNQHFVPGNEIKKYSKIIFDELKEQNYLKNSKDLNQFAKNTANFIMELNALHPFREGNGRTQRIF
INQLAKNAGYKLDLNLISKENMIMACIEASQLKPWRLEALIKTNLKSLKQNLDRDCRVNLSQYNLKE

Download         Length: 684 bp

>T73159 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
GTGATAGATAAAATATTGAATTTTATGAATAATGGCATTCCTAAAAATGACTTTGATAGACAACTTTTAGCTTCAAATTT
AGTTGGTGCAAAAAATTTAAAAGAATTAAATAGACTTGAGCGGATTATTACCATACAAAAAATCAACGATTTGGATATTA
ATCCTATAAAAGGAAATTTTGACTATCAACACTTAAAAAATATTCATAAGTTCATTTTTGAATATGTATATGTCTTTGCT
GGATTTGATAGAGCAGATATTGGATTACAAGGTGCATTTTTAAAAGGAAATCAACATTTTGTTCCTGGTAACGAAATTAA
AAAATACTCTAAGATAATTTTTGATGAATTAAAAGAACAAAATTATTTAAAAAACTCTAAAGATTTAAATCAATTTGCAA
AAAATACTGCAAATTTTATTATGGAACTTAACGCTCTTCACCCATTCCGCGAAGGTAACGGACGCACTCAAAGAATATTT
ATAAACCAACTTGCAAAAAATGCTGGATATAAATTGGACTTAAACCTTATATCAAAAGAAAATATGATAATGGCTTGCAT
AGAAGCTTCTCAGCTTAAGCCTTGGAGATTAGAAGCTCTAATCAAAACAAATCTAAAAAGCTTGAAGCAAAATTTAGATA
GAGATTGTAGAGTAAATTTATCACAATATAATTTAAAGGAATAA

Antitoxin


Download         Length: 80 a.a.        Molecular weight: 9361.67 Da        Isoelectric Point: 5.6880

>AT73159 WP_089188300.1 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
INMTYPEVHSLKESLAILDKYKNELNKEQYNSINSTIHNFAIESMYANERDILNMIRVQKREITADEIIAQYKKEWGVL

Download         Length: 240 bp

>AT73159 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
ATAAATATGACATATCCAGAAGTACATAGTTTAAAAGAGAGCTTAGCAATACTTGATAAATATAAAAATGAGCTTAATAA
AGAGCAATACAATAGCATAAACTCTACAATACACAACTTTGCTATTGAAAGTATGTATGCCAATGAAAGAGATATTTTAA
ATATGATCAGAGTACAAAAAAGAGAGATAACAGCAGATGAAATTATAGCCCAGTATAAAAAAGAATGGGGCGTATTGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References