Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | FicTA/Fic(toxin) |
| Location | 1077422..1078341 | Replicon | chromosome |
| Accession | NZ_CP019683 | ||
| Organism | Campylobacter sputorum bv. faecalis CCUG 20703 | ||
Toxin (Protein)
| Gene name | Fic | Uniprot ID | - |
| Locus tag | CSF_RS05365 | Protein ID | WP_089188301.1 |
| Coordinates | 1077658..1078341 (+) | Length | 228 a.a. |
Antitoxin (Protein)
| Gene name | Fti | Uniprot ID | - |
| Locus tag | CSF_RS05360 | Protein ID | WP_089188300.1 |
| Coordinates | 1077422..1077661 (+) | Length | 80 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CSF_RS05330 | 1073412..1074185 | - | 774 | WP_089188296.1 | 5-oxoprolinase subunit PxpA | - |
| CSF_RS05335 | 1074496..1075191 | + | 696 | WP_089188297.1 | ABC transporter permease | - |
| CSF_RS05340 | 1075335..1076024 | + | 690 | WP_089188298.1 | TVP38/TMEM64 family protein | - |
| CSF_RS05345 | 1075990..1076619 | + | 630 | WP_089182653.1 | TVP38/TMEM64 family protein | - |
| CSF_RS05350 | 1076864..1077100 | + | 237 | WP_089188299.1 | hypothetical protein | - |
| CSF_RS05360 | 1077422..1077661 | + | 240 | WP_089188300.1 | hypothetical protein | Antitoxin |
| CSF_RS05365 | 1077658..1078341 | + | 684 | WP_089188301.1 | Fic family protein | Toxin |
| CSF_RS05370 | 1078345..1078555 | + | 211 | Protein_1044 | hypothetical protein | - |
| CSF_RS05375 | 1078734..1079120 | + | 387 | WP_089182655.1 | rhodanese-like domain-containing protein | - |
| CSF_RS05380 | 1079117..1080565 | + | 1449 | WP_089188302.1 | TIGR04282 family arsenosugar biosynthesis glycosyltransferase | - |
| CSF_RS05385 | 1080550..1081206 | + | 657 | WP_089188303.1 | TIGR04283 family arsenosugar biosynthesis glycosyltransferase | - |
| CSF_RS05390 | 1081193..1082164 | + | 972 | WP_089182658.1 | (Fe-S)-binding protein | - |
| CSF_RS05395 | 1082215..1083075 | + | 861 | WP_089188780.1 | arsenosugar biosynthesis radical SAM protein ArsS | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 228 a.a. Molecular weight: 26406.52 Da Isoelectric Point: 9.9669
>T73159 WP_089188301.1 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
VIDKILNFMNNGIPKNDFDRQLLASNLVGAKNLKELNRLERIITIQKINDLDINPIKGNFDYQHLKNIHKFIFEYVYVFA
GFDRADIGLQGAFLKGNQHFVPGNEIKKYSKIIFDELKEQNYLKNSKDLNQFAKNTANFIMELNALHPFREGNGRTQRIF
INQLAKNAGYKLDLNLISKENMIMACIEASQLKPWRLEALIKTNLKSLKQNLDRDCRVNLSQYNLKE
VIDKILNFMNNGIPKNDFDRQLLASNLVGAKNLKELNRLERIITIQKINDLDINPIKGNFDYQHLKNIHKFIFEYVYVFA
GFDRADIGLQGAFLKGNQHFVPGNEIKKYSKIIFDELKEQNYLKNSKDLNQFAKNTANFIMELNALHPFREGNGRTQRIF
INQLAKNAGYKLDLNLISKENMIMACIEASQLKPWRLEALIKTNLKSLKQNLDRDCRVNLSQYNLKE
Download Length: 684 bp
>T73159 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
GTGATAGATAAAATATTGAATTTTATGAATAATGGCATTCCTAAAAATGACTTTGATAGACAACTTTTAGCTTCAAATTT
AGTTGGTGCAAAAAATTTAAAAGAATTAAATAGACTTGAGCGGATTATTACCATACAAAAAATCAACGATTTGGATATTA
ATCCTATAAAAGGAAATTTTGACTATCAACACTTAAAAAATATTCATAAGTTCATTTTTGAATATGTATATGTCTTTGCT
GGATTTGATAGAGCAGATATTGGATTACAAGGTGCATTTTTAAAAGGAAATCAACATTTTGTTCCTGGTAACGAAATTAA
AAAATACTCTAAGATAATTTTTGATGAATTAAAAGAACAAAATTATTTAAAAAACTCTAAAGATTTAAATCAATTTGCAA
AAAATACTGCAAATTTTATTATGGAACTTAACGCTCTTCACCCATTCCGCGAAGGTAACGGACGCACTCAAAGAATATTT
ATAAACCAACTTGCAAAAAATGCTGGATATAAATTGGACTTAAACCTTATATCAAAAGAAAATATGATAATGGCTTGCAT
AGAAGCTTCTCAGCTTAAGCCTTGGAGATTAGAAGCTCTAATCAAAACAAATCTAAAAAGCTTGAAGCAAAATTTAGATA
GAGATTGTAGAGTAAATTTATCACAATATAATTTAAAGGAATAA
GTGATAGATAAAATATTGAATTTTATGAATAATGGCATTCCTAAAAATGACTTTGATAGACAACTTTTAGCTTCAAATTT
AGTTGGTGCAAAAAATTTAAAAGAATTAAATAGACTTGAGCGGATTATTACCATACAAAAAATCAACGATTTGGATATTA
ATCCTATAAAAGGAAATTTTGACTATCAACACTTAAAAAATATTCATAAGTTCATTTTTGAATATGTATATGTCTTTGCT
GGATTTGATAGAGCAGATATTGGATTACAAGGTGCATTTTTAAAAGGAAATCAACATTTTGTTCCTGGTAACGAAATTAA
AAAATACTCTAAGATAATTTTTGATGAATTAAAAGAACAAAATTATTTAAAAAACTCTAAAGATTTAAATCAATTTGCAA
AAAATACTGCAAATTTTATTATGGAACTTAACGCTCTTCACCCATTCCGCGAAGGTAACGGACGCACTCAAAGAATATTT
ATAAACCAACTTGCAAAAAATGCTGGATATAAATTGGACTTAAACCTTATATCAAAAGAAAATATGATAATGGCTTGCAT
AGAAGCTTCTCAGCTTAAGCCTTGGAGATTAGAAGCTCTAATCAAAACAAATCTAAAAAGCTTGAAGCAAAATTTAGATA
GAGATTGTAGAGTAAATTTATCACAATATAATTTAAAGGAATAA
Antitoxin
Download Length: 80 a.a. Molecular weight: 9361.67 Da Isoelectric Point: 5.6880
>AT73159 WP_089188300.1 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
INMTYPEVHSLKESLAILDKYKNELNKEQYNSINSTIHNFAIESMYANERDILNMIRVQKREITADEIIAQYKKEWGVL
INMTYPEVHSLKESLAILDKYKNELNKEQYNSINSTIHNFAIESMYANERDILNMIRVQKREITADEIIAQYKKEWGVL
Download Length: 240 bp
>AT73159 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
ATAAATATGACATATCCAGAAGTACATAGTTTAAAAGAGAGCTTAGCAATACTTGATAAATATAAAAATGAGCTTAATAA
AGAGCAATACAATAGCATAAACTCTACAATACACAACTTTGCTATTGAAAGTATGTATGCCAATGAAAGAGATATTTTAA
ATATGATCAGAGTACAAAAAAGAGAGATAACAGCAGATGAAATTATAGCCCAGTATAAAAAAGAATGGGGCGTATTGTGA
ATAAATATGACATATCCAGAAGTACATAGTTTAAAAGAGAGCTTAGCAATACTTGATAAATATAAAAATGAGCTTAATAA
AGAGCAATACAATAGCATAAACTCTACAATACACAACTTTGCTATTGAAAGTATGTATGCCAATGAAAGAGATATTTTAA
ATATGATCAGAGTACAAAAAAGAGAGATAACAGCAGATGAAATTATAGCCCAGTATAAAAAAGAATGGGGCGTATTGTGA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|
Antitoxin
| Source | ID | Structure |
|---|