Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) FicTA/Fic(toxin)
Location 1077422..1078341 Replicon chromosome
Accession NZ_CP019683
Organism Campylobacter sputorum bv. faecalis CCUG 20703

Toxin (Protein)


Gene name Fic Uniprot ID -
Locus tag CSF_RS05365 Protein ID WP_089188301.1
Coordinates 1077658..1078341 (+) Length 228 a.a.

Antitoxin (Protein)


Gene name Fti Uniprot ID -
Locus tag CSF_RS05360 Protein ID WP_089188300.1
Coordinates 1077422..1077661 (+) Length 80 a.a.

Genomic Context

CSF_RS05335CSF_RS05340CSF_RS05345CSF_RS05350CSF_RS05360CSF_RS05365CSF_RS05370CSF_RS05375CSF_RS05380CSF_RS05385CSF_RS05390CSF_RS05395CSF_RS05330
Location: 1074496..1075191 (696 bp)
Type: Others
Protein ID: WP_089188297.1
Location: 1075335..1076024 (690 bp)
Type: Others
Protein ID: WP_089188298.1
Location: 1075990..1076619 (630 bp)
Type: Others
Protein ID: WP_089182653.1
Location: 1076864..1077100 (237 bp)
Type: Others
Protein ID: WP_089188299.1
Location: 1077422..1077661 (240 bp)
Type: Antitoxin
Protein ID: WP_089188300.1
Location: 1077658..1078341 (684 bp)
Type: Toxin
Protein ID: WP_089188301.1
Location: 1078345..1078555 (211 bp)
Type: Others
Protein ID: Protein_1044
Location: 1078734..1079120 (387 bp)
Type: Others
Protein ID: WP_089182655.1
Location: 1079117..1080565 (1449 bp)
Type: Others
Protein ID: WP_089188302.1
Location: 1080550..1081206 (657 bp)
Type: Others
Protein ID: WP_089188303.1
Location: 1081193..1082164 (972 bp)
Type: Others
Protein ID: WP_089182658.1
Location: 1082215..1083075 (861 bp)
Type: Others
Protein ID: WP_089188780.1
Location: 1073412..1074185 (774 bp)
Type: Others
Protein ID: WP_089188296.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
CSF_RS053301073412..1074185-774WP_089188296.15-oxoprolinase subunit PxpA-
CSF_RS053351074496..1075191+696WP_089188297.1ABC transporter permease-
CSF_RS053401075335..1076024+690WP_089188298.1TVP38/TMEM64 family protein-
CSF_RS053451075990..1076619+630WP_089182653.1TVP38/TMEM64 family protein-
CSF_RS053501076864..1077100+237WP_089188299.1hypothetical protein-
CSF_RS053601077422..1077661+240WP_089188300.1hypothetical proteinAntitoxin
CSF_RS053651077658..1078341+684WP_089188301.1Fic family proteinToxin
CSF_RS053701078345..1078555+211Protein_1044hypothetical protein-
CSF_RS053751078734..1079120+387WP_089182655.1rhodanese-like domain-containing protein-
CSF_RS053801079117..1080565+1449WP_089188302.1TIGR04282 family arsenosugar biosynthesis glycosyltransferase-
CSF_RS053851080550..1081206+657WP_089188303.1TIGR04283 family arsenosugar biosynthesis glycosyltransferase-
CSF_RS053901081193..1082164+972WP_089182658.1(Fe-S)-binding protein-
CSF_RS053951082215..1083075+861WP_089188780.1arsenosugar biosynthesis radical SAM protein ArsS-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Fido domain

(60-164)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 228 a.a.        Molecular weight: 26406.52 Da        Isoelectric Point: 9.9669

>T73159 WP_089188301.1 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
VIDKILNFMNNGIPKNDFDRQLLASNLVGAKNLKELNRLERIITIQKINDLDINPIKGNFDYQHLKNIHKFIFEYVYVFA
GFDRADIGLQGAFLKGNQHFVPGNEIKKYSKIIFDELKEQNYLKNSKDLNQFAKNTANFIMELNALHPFREGNGRTQRIF
INQLAKNAGYKLDLNLISKENMIMACIEASQLKPWRLEALIKTNLKSLKQNLDRDCRVNLSQYNLKE

Download         Length: 684 bp

>T73159 NZ_CP019683:1077658-1078341 [Campylobacter sputorum bv. faecalis CCUG 20703]
GTGATAGATAAAATATTGAATTTTATGAATAATGGCATTCCTAAAAATGACTTTGATAGACAACTTTTAGCTTCAAATTT
AGTTGGTGCAAAAAATTTAAAAGAATTAAATAGACTTGAGCGGATTATTACCATACAAAAAATCAACGATTTGGATATTA
ATCCTATAAAAGGAAATTTTGACTATCAACACTTAAAAAATATTCATAAGTTCATTTTTGAATATGTATATGTCTTTGCT
GGATTTGATAGAGCAGATATTGGATTACAAGGTGCATTTTTAAAAGGAAATCAACATTTTGTTCCTGGTAACGAAATTAA
AAAATACTCTAAGATAATTTTTGATGAATTAAAAGAACAAAATTATTTAAAAAACTCTAAAGATTTAAATCAATTTGCAA
AAAATACTGCAAATTTTATTATGGAACTTAACGCTCTTCACCCATTCCGCGAAGGTAACGGACGCACTCAAAGAATATTT
ATAAACCAACTTGCAAAAAATGCTGGATATAAATTGGACTTAAACCTTATATCAAAAGAAAATATGATAATGGCTTGCAT
AGAAGCTTCTCAGCTTAAGCCTTGGAGATTAGAAGCTCTAATCAAAACAAATCTAAAAAGCTTGAAGCAAAATTTAGATA
GAGATTGTAGAGTAAATTTATCACAATATAATTTAAAGGAATAA

Antitoxin


Download         Length: 80 a.a.        Molecular weight: 9361.67 Da        Isoelectric Point: 5.6880

>AT73159 WP_089188300.1 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
INMTYPEVHSLKESLAILDKYKNELNKEQYNSINSTIHNFAIESMYANERDILNMIRVQKREITADEIIAQYKKEWGVL

Download         Length: 240 bp

>AT73159 NZ_CP019683:1077422-1077661 [Campylobacter sputorum bv. faecalis CCUG 20703]
ATAAATATGACATATCCAGAAGTACATAGTTTAAAAGAGAGCTTAGCAATACTTGATAAATATAAAAATGAGCTTAATAA
AGAGCAATACAATAGCATAAACTCTACAATACACAACTTTGCTATTGAAAGTATGTATGCCAATGAAAGAGATATTTTAA
ATATGATCAGAGTACAAAAAAGAGAGATAACAGCAGATGAAATTATAGCCCAGTATAAAAAAGAATGGGGCGTATTGTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References