72621

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 427746..428096 Replicon chromosome
Accession NZ_CP019516
Organism Xanthomonas oryzae pv. oryzae strain CR1-5

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag BXU04_RS02020 Protein ID WP_011257368.1
Coordinates 427962..428096 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag BXU04_RS02015 Protein ID WP_011407410.1
Coordinates 427746..427898 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BXU04_RS01990 (BXU04_02170) 424026..424709 - 684 WP_011257363.1 dTMP kinase -
BXU04_RS01995 425189..425731 - 543 Protein_382 GTPase -
BXU04_RS02000 (BXU04_02190) 425728..426183 - 456 Protein_383 hypothetical protein -
BXU04_RS02005 426175..426393 - 219 Protein_384 hypothetical protein -
BXU04_RS02010 (BXU04_02195) 426715..427638 + 924 WP_011407409.1 arginase -
BXU04_RS02015 (BXU04_02200) 427746..427898 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
BXU04_RS02020 (BXU04_02205) 427962..428096 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
BXU04_RS02025 (BXU04_02210) 428337..428546 + 210 WP_011407411.1 CsbD family protein -
BXU04_RS02030 (BXU04_02215) 428715..430004 + 1290 WP_069959696.1 tryptophan--tRNA ligase -
BXU04_RS02035 (BXU04_02220) 430135..431079 + 945 WP_027704118.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T72621 WP_011257368.1 NZ_CP019516:427962-428096 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T72621 NZ_CP019516:427962-428096 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT72621 WP_011407410.1 NZ_CP019516:427746-427898 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT72621 NZ_CP019516:427746-427898 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References