Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pmenTA/darT(toxin)
Location 2971296..2973007 Replicon chromosome
Accession NZ_CP019509
Organism Aquaspirillum sp. LM1

Toxin (Protein)


Gene name pmenT Uniprot ID -
Locus tag BXU06_RS12780 Protein ID WP_077300276.1
Coordinates 2972366..2973007 (-) Length 214 a.a.

Antitoxin (Protein)


Gene name pmenA Uniprot ID -
Locus tag BXU06_RS12775 Protein ID WP_077300273.1
Coordinates 2971296..2972366 (-) Length 357 a.a.

Genomic Context

BXU06_RS12745BXU06_RS12760BXU06_RS12750BXU06_RS12755BXU06_RS12765BXU06_RS12770BXU06_RS12775BXU06_RS12780BXU06_RS12785BXU06_RS12790
Location: 2967205..2967726 (522 bp)
Type: Others
Protein ID: WP_077300258.1
Location: 2969511..2970029 (519 bp)
Type: Others
Protein ID: WP_077302872.1
Location: 2967728..2968924 (1197 bp)
Type: Others
Protein ID: WP_077300261.1
Location: 2968924..2969277 (354 bp)
Type: Others
Protein ID: WP_077300264.1
Location: 2970037..2970504 (468 bp)
Type: Others
Protein ID: WP_077300267.1
Location: 2970569..2970997 (429 bp)
Type: Others
Protein ID: WP_077300270.1
Location: 2971296..2972366 (1071 bp)
Type: Antitoxin
Protein ID: WP_077300273.1
Location: 2972366..2973007 (642 bp)
Type: Toxin
Protein ID: WP_077300276.1
Location: 2973161..2974135 (975 bp)
Type: Others
Protein ID: WP_077302874.1
Location: 2974237..2977122 (2886 bp)
Type: Others
Protein ID: WP_077300278.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
BXU06_RS127452967205..2967726+522WP_077300258.1xanthine phosphoribosyltransferase-
BXU06_RS127502967728..2968924-1197WP_077300261.1urate hydroxylase PuuD-
BXU06_RS127552968924..2969277-354WP_077300264.1hydroxyisourate hydrolase-
BXU06_RS127602969511..2970029+519WP_077302872.12-oxo-4-hydroxy-4-carboxy-5-ureidoimidazoline decarboxylase-
BXU06_RS127652970037..2970504-468WP_077300267.1cupin domain-containing protein-
BXU06_RS127702970569..2970997-429WP_077300270.1PaaI family thioesterase-
BXU06_RS127752971296..2972366-1071WP_077300273.1macro domain-containing proteinAntitoxin
BXU06_RS127802972366..2973007-642WP_077300276.1DUF4433 domain-containing proteinToxin
BXU06_RS127852973161..2974135-975WP_077302874.1LysR family transcriptional regulator-
BXU06_RS127902974237..2977122-2886WP_077300278.1bifunctional diguanylate cyclase/phosphodiesterase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

ssDNA thymidine ADP-ribosyltransferase, DarT

(14-213)

Antitoxin

Macro domain

(18-130)


Sequences

Toxin        


Download         Length: 214 a.a.        Molecular weight: 24614.14 Da        Isoelectric Point: 7.6105

>T72572 WP_077300276.1 NZ_CP019509:c2973007-2972366 [Aquaspirillum sp. LM1]
MRYTSLNPGKALIWRIVHRDNLPWILDHGLHCGNSAIHALQWVSIGHPELIGKRATHPVPLPPGGFLNDYVPFYFTPFSP
MLSNIHTGRGVQKRQNDEIVILVSSMHHLQQQGVSCLFTDSHAYYQWAQFYSNLADLDKIDWPLLQRRDFKRDADDPAKF
ERYQAEALVHQHLPVNGLLGIVCYTETLKQDIEQAVQIRQLNLPVHVRTGWYF

Download         Length: 642 bp

>T72572 NZ_CP019509:c2973007-2972366 [Aquaspirillum sp. LM1]
ATGCGCTATACCAGCCTCAACCCGGGAAAAGCCCTGATCTGGCGCATCGTTCATCGCGATAATCTGCCCTGGATTCTGGA
CCATGGCCTGCACTGCGGAAACAGTGCCATTCATGCCTTGCAGTGGGTGAGCATTGGCCATCCAGAGTTGATCGGCAAAC
GCGCCACCCATCCCGTGCCATTGCCACCCGGTGGGTTTTTGAACGACTATGTGCCGTTCTACTTCACCCCATTCTCGCCA
ATGCTGAGCAATATCCATACGGGCAGAGGGGTTCAGAAACGGCAAAATGACGAGATCGTGATTCTGGTCTCCAGCATGCA
TCATCTGCAGCAGCAAGGTGTGTCGTGTTTGTTTACCGATAGCCATGCCTACTACCAATGGGCACAGTTTTATTCCAACC
TCGCCGACCTCGATAAAATTGACTGGCCGCTGTTGCAGCGACGAGATTTTAAACGGGATGCGGATGATCCTGCCAAATTC
GAGCGTTACCAGGCTGAAGCGCTGGTTCATCAGCATCTGCCTGTCAATGGATTACTTGGCATCGTGTGCTACACCGAAAC
ACTGAAGCAAGACATTGAACAGGCCGTGCAAATCCGTCAGCTCAATCTGCCGGTGCATGTTCGAACAGGGTGGTATTTCT
GA

Antitoxin


Download         Length: 357 a.a.        Molecular weight: 40105.17 Da        Isoelectric Point: 7.7271

>AT72572 WP_077300273.1 NZ_CP019509:c2972366-2971296 [Aquaspirillum sp. LM1]
MITFTQGNLLEARSEALVNTVNTVGVMGKGIALMFKERFADNFRLYAAACKAQQVQTGKMFITQVNELEGPRWVVNFPTK
QHWRSPSQLSWVEEGLQDLRRFLLENQIKSIAIPPLGAGHGGLDWAEVRPCIEAALGDLDIDILVFEPTRQYQNIAKRTG
VAHLTPARALIAELVRRYWVPGMECSLLEIQKLAWFLERKIAQFGLPSLDLRFQAHKYGPYADRLRHLLTGLDGSYLHCE
KRISDASPLDVIWFDDSRKTVLQTYLKTEASEYTPALEASATLIDGFESPFGMELLATVDWLLCRNGVPPSVPALREGLR
HWQGGPDAAARKVRLFNDRALEIALTRLRYDAARSA

Download         Length: 1071 bp

>AT72572 NZ_CP019509:c2972366-2971296 [Aquaspirillum sp. LM1]
ATGATTACGTTTACACAAGGTAATTTACTGGAGGCCCGCAGCGAGGCGCTGGTCAACACGGTCAACACCGTGGGCGTCAT
GGGCAAGGGCATTGCGCTGATGTTCAAAGAGCGCTTTGCTGACAATTTTCGTTTGTACGCCGCTGCATGCAAAGCGCAGC
AAGTACAAACCGGCAAGATGTTCATCACCCAGGTCAACGAACTGGAAGGGCCTCGTTGGGTGGTGAACTTTCCCACCAAA
CAGCACTGGCGCTCACCGTCGCAGTTGAGCTGGGTGGAAGAGGGCTTGCAGGATTTGCGTCGCTTTTTGCTGGAAAACCA
GATCAAGTCGATCGCGATTCCTCCACTGGGGGCCGGTCATGGCGGACTGGACTGGGCGGAAGTCAGGCCATGCATTGAAG
CAGCGTTGGGTGATCTCGATATCGACATCCTGGTGTTTGAACCCACCAGGCAGTACCAGAATATCGCCAAACGCACAGGC
GTTGCACACCTCACGCCCGCACGCGCCTTAATTGCCGAACTGGTGCGGCGCTACTGGGTGCCTGGTATGGAATGCAGCCT
GCTGGAAATTCAGAAGCTTGCCTGGTTTCTGGAGCGCAAGATTGCACAGTTTGGCCTGCCATCCCTGGATCTACGCTTTC
AAGCGCACAAATATGGGCCATACGCTGACCGTTTGCGCCATCTGCTGACAGGGCTGGATGGCAGCTATCTGCACTGCGAA
AAACGTATCAGTGATGCAAGTCCCCTGGATGTGATCTGGTTTGACGATAGCCGCAAAACCGTATTGCAAACCTATCTGAA
AACCGAAGCCAGTGAGTACACTCCCGCGCTGGAGGCTAGCGCTACGCTGATTGATGGCTTTGAGTCACCATTTGGCATGG
AATTGCTGGCCACGGTAGATTGGCTGTTGTGTCGTAACGGTGTTCCCCCCTCTGTGCCAGCGCTGCGCGAGGGTCTGCGC
CATTGGCAAGGCGGCCCCGACGCAGCGGCGCGCAAAGTCCGGCTATTTAACGATCGTGCACTGGAGATTGCGTTGACGCG
TTTACGTTACGACGCAGCCAGATCAGCCTGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References