Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 2446777..2446845 | Replicon | chromosome |
| Accession | NZ_CP018237 | ||
| Organism | Escherichia coli strain 155 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 2446815..2446845 (-) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 2446777..2446845 (+) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| BFL20_RS13525 | 2443934..2445373 | + | 1440 | WP_001302304.1 | 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF | - |
| BFL20_RS13530 | 2445491..2445727 | + | 237 | WP_001295499.1 | DUF1480 family protein | - |
| BFL20_RS13535 | 2445832..2446023 | + | 192 | WP_001296140.1 | YebW family protein | - |
| BFL20_RS13540 | 2446024..2446680 | - | 657 | WP_000812736.1 | protein-serine/threonine phosphatase | - |
| - | 2446777..2446845 | + | 69 | - | - | Antitoxin |
| - | 2446815..2446845 | - | 31 | - | - | Toxin |
| BFL20_RS13550 | 2447413..2448426 | - | 1014 | WP_149025289.1 | M85 family metallopeptidase | - |
| BFL20_RS13560 | 2448829..2449008 | - | 180 | WP_187655766.1 | phage tail fiber C-terminal domain-containing protein | - |
| BFL20_RS13575 | 2449007..2450220 | + | 1214 | WP_162829202.1 | IS3 family transposase | - |
| BFL20_RS31035 | 2450223..2450438 | - | 216 | WP_077891446.1 | phage tail fiber C-terminal domain-containing protein | - |
| BFL20_RS13580 | 2450413..2451726 | - | 1314 | WP_077891445.1 | phage tail protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
