Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/RelE-RHH
Location 4517286..4517818 Replicon chromosome
Accession NZ_CP017946
Organism Bosea sp. Tri-49

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag BLM15_RS21860 Protein ID WP_126114738.1
Coordinates 4517286..4517570 (-) Length 95 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag BLM15_RS21865 Protein ID WP_126114739.1
Coordinates 4517567..4517818 (-) Length 84 a.a.

Genomic Context

BLM15_RS21835BLM15_RS21840BLM15_RS21845BLM15_RS21850BLM15_RS21855BLM15_RS21860BLM15_RS21865BLM15_RS21870BLM15_RS21875BLM15_RS21880BLM15_RS21885BLM15_RS21890
Location: 4512904..4513722 (819 bp)
Type: Others
Protein ID: WP_126114734.1
Location: 4513724..4514332 (609 bp)
Type: Others
Protein ID: WP_126114735.1
Location: 4514336..4515088 (753 bp)
Type: Others
Protein ID: WP_126114736.1
Location: 4515158..4516186 (1029 bp)
Type: Others
Protein ID: WP_206438553.1
Location: 4516250..4517272 (1023 bp)
Type: Others
Protein ID: WP_126114737.1
Location: 4517286..4517570 (285 bp)
Type: Toxin
Protein ID: WP_126114738.1
Location: 4517567..4517818 (252 bp)
Type: Antitoxin
Protein ID: WP_126114739.1
Location: 4517917..4518663 (747 bp)
Type: Others
Protein ID: WP_126114740.1
Location: 4518660..4519943 (1284 bp)
Type: Others
Protein ID: WP_126114741.1
Location: 4519955..4521085 (1131 bp)
Type: Others
Protein ID: WP_126114742.1
Location: 4521087..4521548 (462 bp)
Type: Others
Protein ID: WP_126114743.1
Location: 4521639..4521920 (282 bp)
Type: Others
Protein ID: WP_057191987.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
BLM15_RS218354512904..4513722+819WP_126114734.1TPM domain-containing protein-
BLM15_RS218404513724..4514332+609WP_126114735.1hypothetical protein-
BLM15_RS218454514336..4515088-753WP_126114736.1DUF1223 domain-containing protein-
BLM15_RS218504515158..4516186-1029WP_206438553.1lipid A biosynthesis lauroyl acyltransferase-
BLM15_RS218554516250..4517272-1023WP_126114737.1zinc-binding dehydrogenase-
BLM15_RS218604517286..4517570-285WP_126114738.1type II toxin-antitoxin system RelE/ParE family toxinToxin
BLM15_RS218654517567..4517818-252WP_126114739.1ribbon-helix-helix protein, CopG familyAntitoxin
BLM15_RS218704517917..4518663-747WP_126114740.1SDR family oxidoreductase-
BLM15_RS218754518660..4519943-1284WP_126114741.1beta-ketoacyl-ACP synthase-
BLM15_RS218804519955..4521085-1131WP_126114742.1beta-ketoacyl-ACP synthase-
BLM15_RS218854521087..4521548-462WP_126114743.1beta-hydroxyacyl-ACP dehydratase-
BLM15_RS218904521639..4521920-282WP_057191987.1acyl carrier protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, RelE/ParE toxin family

(2-88)

Antitoxin

Ribbon-helix-helix protein, CopG

(5-41)


Sequences

Toxin        


Download         Length: 95 a.a.        Molecular weight: 10427.12 Da        Isoelectric Point: 10.9484

>T68395 WP_126114738.1 NZ_CP017946:c4517570-4517286 [Bosea sp. Tri-49]
MKLVWTARAKADLRAIALYVADFSPTAALALVRRLRSAAAQLVDYPHSGRAGRVEETRELVVAGTSYILPYRVRDGRVEI
LAVLHASRQWPGQL

Download         Length: 285 bp

>T68395 NZ_CP017946:c4517570-4517286 [Bosea sp. Tri-49]
ATGAAGCTCGTCTGGACCGCAAGAGCAAAGGCTGACCTTCGCGCTATCGCCCTCTATGTCGCCGACTTCAGTCCAACGGC
AGCGCTCGCCCTCGTCCGCCGGCTCCGCTCAGCCGCCGCCCAGTTGGTCGATTATCCGCATAGTGGCCGAGCCGGACGGG
TAGAAGAGACGCGTGAACTCGTGGTAGCCGGCACCAGCTACATCCTTCCCTATCGCGTCCGCGACGGACGCGTCGAAATC
CTCGCTGTCCTGCACGCCTCGCGGCAATGGCCGGGCCAGCTCTGA

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9309.35 Da        Isoelectric Point: 4.1319

>AT68395 WP_126114739.1 NZ_CP017946:c4517818-4517567 [Bosea sp. Tri-49]
MTAAFTIRLDDETLAKLDALAADTDRSRNWLAAKAIENYIELNAWQIARIKEGIAQADRGEFATEEELDAIEAELQARID
STR

Download         Length: 252 bp

>AT68395 NZ_CP017946:c4517818-4517567 [Bosea sp. Tri-49]
ATGACGGCCGCTTTCACGATCCGCCTCGACGACGAGACTCTCGCCAAACTCGACGCGTTGGCGGCAGATACCGATCGCTC
GCGCAACTGGCTCGCCGCCAAGGCGATCGAGAATTACATCGAACTCAATGCCTGGCAGATTGCCCGCATCAAGGAGGGCA
TCGCTCAGGCCGATCGTGGTGAATTCGCCACGGAGGAAGAGCTCGATGCGATCGAGGCGGAGCTGCAGGCACGCATCGAT
TCGACCAGATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References