Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | relBE/ParE-YafN |
Location | 38759..39287 | Replicon | plasmid pL291 |
Accession | NZ_CP017909 | ||
Organism | Vibrio alginolyticus strain K06K5 |
Toxin (Protein)
Gene name | relE | Uniprot ID | A0A1W6UUU0 |
Locus tag | K06K5_RS25215 | Protein ID | WP_025767362.1 |
Coordinates | 39003..39287 (+) | Length | 95 a.a. |
Antitoxin (Protein)
Gene name | relB | Uniprot ID | - |
Locus tag | K06K5_RS25210 | Protein ID | WP_086048372.1 |
Coordinates | 38759..39013 (+) | Length | 85 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
K06K5_RS25175 | 34088..34462 | - | 375 | WP_025767354.1 | hypothetical protein | - |
K06K5_RS25180 | 34643..35473 | - | 831 | WP_086048366.1 | hypothetical protein | - |
K06K5_RS26960 | 35620..35796 | - | 177 | WP_157664648.1 | hypothetical protein | - |
K06K5_RS25185 | 35807..36400 | - | 594 | WP_086048367.1 | hypothetical protein | - |
K06K5_RS25190 | 36578..36949 | + | 372 | WP_157666753.1 | hypothetical protein | - |
K06K5_RS25195 | 36998..37231 | - | 234 | WP_086048369.1 | hypothetical protein | - |
K06K5_RS25200 | 37250..37684 | - | 435 | WP_086048370.1 | hypothetical protein | - |
K06K5_RS25205 | 37750..38502 | - | 753 | WP_086048371.1 | hypothetical protein | - |
K06K5_RS25210 | 38759..39013 | + | 255 | WP_086048372.1 | type II toxin-antitoxin system Phd/YefM family antitoxin | Antitoxin |
K06K5_RS25215 | 39003..39287 | + | 285 | WP_025767362.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
K06K5_RS25225 | 39524..39712 | + | 189 | WP_025767364.1 | hypothetical protein | - |
K06K5_RS25230 | 39725..39988 | + | 264 | WP_025767365.1 | hypothetical protein | - |
K06K5_RS25235 | 40223..40543 | - | 321 | WP_086048373.1 | hypothetical protein | - |
K06K5_RS25240 | 40795..41541 | + | 747 | WP_025767367.1 | hypothetical protein | - |
K06K5_RS25245 | 42776..43084 | + | 309 | WP_086048374.1 | hypothetical protein | - |
K06K5_RS25250 | 43382..43702 | + | 321 | WP_086048375.1 | hypothetical protein | - |
K06K5_RS25255 | 43712..43915 | + | 204 | WP_025767370.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|---|---|---|---|---|---|---|
- | inside | Non-Mobilizable plasmid | - | - | 1..291285 | 291285 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 95 a.a. Molecular weight: 11103.10 Da Isoelectric Point: 10.6691
>T68275 WP_025767362.1 NZ_CP017909:39003-39287 [Vibrio alginolyticus]
MTYKLVFKTEAEKEWRKLDSTIKSQFKKKLIERLENPHVPTAKLSSMENCYKIKLRSAGYRLVYQVRDQEVIISVVAVGK
RERNQVYKIAAKRV
MTYKLVFKTEAEKEWRKLDSTIKSQFKKKLIERLENPHVPTAKLSSMENCYKIKLRSAGYRLVYQVRDQEVIISVVAVGK
RERNQVYKIAAKRV
Download Length: 285 bp
>T68275 NZ_CP017909:39003-39287 [Vibrio alginolyticus]
ATGACTTATAAGTTAGTTTTCAAGACTGAGGCAGAGAAAGAATGGCGCAAGTTGGACAGCACTATTAAGTCTCAGTTTAA
GAAGAAGCTGATTGAACGTTTAGAAAATCCGCATGTACCAACGGCAAAATTAAGCAGTATGGAGAATTGCTACAAAATAA
AACTGAGAAGTGCAGGATACCGGCTTGTTTATCAAGTGAGAGATCAGGAAGTAATTATTTCAGTTGTGGCAGTTGGTAAG
CGAGAACGTAATCAGGTTTATAAAATCGCTGCAAAAAGAGTGTAG
ATGACTTATAAGTTAGTTTTCAAGACTGAGGCAGAGAAAGAATGGCGCAAGTTGGACAGCACTATTAAGTCTCAGTTTAA
GAAGAAGCTGATTGAACGTTTAGAAAATCCGCATGTACCAACGGCAAAATTAAGCAGTATGGAGAATTGCTACAAAATAA
AACTGAGAAGTGCAGGATACCGGCTTGTTTATCAAGTGAGAGATCAGGAAGTAATTATTTCAGTTGTGGCAGTTGGTAAG
CGAGAACGTAATCAGGTTTATAAAATCGCTGCAAAAAGAGTGTAG
Antitoxin
Download Length: 85 a.a. Molecular weight: 9474.81 Da Isoelectric Point: 3.9953
>AT68275 WP_086048372.1 NZ_CP017909:38759-39013 [Vibrio alginolyticus]
MPTIRPILADNSTSISELKKNPMAVIEQADGFPVAVLNRNQPAFYCVPADAYEMLMDKLEDIELAQIVKEREHSEEIEIS
IDDL
MPTIRPILADNSTSISELKKNPMAVIEQADGFPVAVLNRNQPAFYCVPADAYEMLMDKLEDIELAQIVKEREHSEEIEIS
IDDL
Download Length: 255 bp
>AT68275 NZ_CP017909:38759-39013 [Vibrio alginolyticus]
ATGCCAACAATTCGTCCTATTCTCGCTGATAATTCAACAAGTATCAGCGAACTTAAAAAGAACCCTATGGCAGTCATAGA
ACAAGCTGACGGGTTCCCTGTTGCGGTACTGAACCGTAATCAACCTGCATTTTACTGCGTTCCTGCGGATGCCTATGAAA
TGCTCATGGATAAACTGGAAGATATTGAGCTTGCTCAGATAGTTAAAGAGCGTGAGCATTCTGAAGAAATAGAGATCAGC
ATCGATGACTTATAA
ATGCCAACAATTCGTCCTATTCTCGCTGATAATTCAACAAGTATCAGCGAACTTAAAAAGAACCCTATGGCAGTCATAGA
ACAAGCTGACGGGTTCCCTGTTGCGGTACTGAACCGTAATCAACCTGCATTTTACTGCGTTCCTGCGGATGCCTATGAAA
TGCTCATGGATAAACTGGAAGATATTGAGCTTGCTCAGATAGTTAAAGAGCGTGAGCATTCTGAAGAAATAGAGATCAGC
ATCGATGACTTATAA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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