Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 3120734..3121304 | Replicon | chromosome |
Accession | NZ_CP017595 | ||
Organism | Mycobacterium tuberculosis strain Beijing-like/38774 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | P71650 |
Locus tag | BJM01_RS15405 | Protein ID | WP_003414166.1 |
Coordinates | 3120734..3121090 (-) | Length | 119 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | P0CL61 |
Locus tag | BJM01_RS15410 | Protein ID | WP_003901465.1 |
Coordinates | 3121074..3121304 (-) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BJM01_RS15385 | 3116186..3117874 | - | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
BJM01_RS15390 | 3117878..3118204 | - | 327 | WP_003414157.1 | hypothetical protein | - |
BJM01_RS15395 | 3118377..3118964 | + | 588 | WP_003914429.1 | DUF3558 family protein | - |
BJM01_RS15400 | 3118983..3120632 | + | 1650 | WP_003899485.1 | CocE/NonD family hydrolase | - |
BJM01_RS15405 | 3120734..3121090 | - | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin |
BJM01_RS15410 | 3121074..3121304 | - | 231 | WP_003901465.1 | antitoxin MazE | Antitoxin |
BJM01_RS15415 | 3121347..3122390 | - | 1044 | WP_003414172.1 | DUF2293 domain-containing protein | - |
BJM01_RS21725 | 3122581..3122856 | + | 276 | WP_003911993.1 | DUF1778 domain-containing protein | - |
BJM01_RS21730 | 3123032..3123286 | - | 255 | WP_003917684.1 | hypothetical protein | - |
BJM01_RS15430 | 3123434..3123838 | + | 405 | WP_003414181.1 | hypothetical protein | - |
BJM01_RS15435 | 3123835..3124026 | + | 192 | WP_003414184.1 | hypothetical protein | - |
BJM01_RS15440 | 3124090..3125379 | + | 1290 | Protein_2916 | transposase family protein | - |
BJM01_RS15445 | 3125613..3125870 | + | 258 | WP_003899489.1 | hypothetical protein | - |
BJM01_RS15450 | 3125975..3126286 | + | 312 | WP_003414190.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 119 a.a. Molecular weight: 12858.73 Da Isoelectric Point: 9.1962
>T67608 WP_003414166.1 NZ_CP017595:c3121090-3120734 [Mycobacterium tuberculosis]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
Download Length: 357 bp
>T67608 NZ_CP017595:c3121090-3120734 [Mycobacterium tuberculosis]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
Antitoxin
Download Length: 77 a.a. Molecular weight: 8231.01 Da Isoelectric Point: 4.1809
>AT67608 WP_003901465.1 NZ_CP017595:c3121304-3121074 [Mycobacterium tuberculosis]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
Download Length: 231 bp
>AT67608 NZ_CP017595:c3121304-3121074 [Mycobacterium tuberculosis]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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