Detailed information of TA system TA065319

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): stbE-relB/ParE-YafN
• Location: 478849..479344
• Replicon: chromosome
• Accession: NZ_CP016872
• Organism: Legionella pneumophila subsp. pneumophila strain FFI104

Toxin (Protein)

• Gene name: stbE
• Uniprot ID: Q5WW71
• Locus tag: BE843_RS02105
• Protein ID: WP_011215616.1
• Coordinates: 478849..479106 (-)
• Length: 86 a.a.

Antitoxin (Protein)

• Gene name: relB
• Uniprot ID: Q5WW72
• Locus tag: BE843_RS02110
• Protein ID: WP_011215615.1
• Coordinates: 479096..479344 (-)
• Length: 83 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
BE843_RS02080	474076..474822	+	747	WP_011215621.1	ribosomal large subunit pseudouridine synthase B	-
BE843_RS02085	474993..475442	-	450	WP_011215620.1	YbhB/YbcL family Raf kinase inhibitor-like protein	-
BE843_RS02090	475674..476525	+	852	WP_041173769.1	alpha/beta hydrolase	-
BE843_RS02095	476652..477170	+	519	WP_011215618.1	lpg1453 family Dot/Icm T4SS effector	-
BE843_RS02100	477295..478680	-	1386	WP_011215617.1	MFS transporter	-
BE843_RS02105	478849..479106	-	258	WP_011215616.1	type II toxin-antitoxin system RelE/ParE family toxin	Toxin
BE843_RS02110	479096..479344	-	249	WP_011215615.1	type II toxin-antitoxin system Phd/YefM family antitoxin	Antitoxin
BE843_RS02120	479818..481206	+	1389	Protein_412	MobA/MobL family protein	-
BE843_RS02130	481267..482441	+	1175	WP_155295557.1	IS3 family transposase	-
BE843_RS02135	482486..483655	+	1170	WP_080020610.1	AAA family ATPase	-
BE843_RS02140	483667..484284	+	618	WP_011215613.1	hypothetical protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Toxin-antitoxin system, RelE/ParE toxin family (7-73)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 86 a.a.
• Molecular weight: 10102.81 Da
• Isoelectric Point: 10.5638

>T65319 WP_011215616.1 NZ_CP016872:c479106-478849 [Legionella pneumophila subsp. pneumophila]
MSFELGFLDEALKEWRKLDNNTRDQFKKKLAERLINPRVPASKLSGQKDRYKIKLRNIGYRLVYEVRDAELIVGMCFPTT
QKLNR

Nucleotide

• Length: 258 bp

>T65319 NZ_CP016872:c479106-478849 [Legionella pneumophila subsp. pneumophila]
ATGAGCTTTGAGCTTGGATTTTTAGATGAGGCATTAAAAGAATGGAGAAAGCTTGACAATAATACACGCGATCAATTTAA
GAAAAAACTTGCAGAGCGTCTTATCAATCCTCGTGTACCTGCCTCGAAATTAAGTGGTCAAAAAGATCGGTATAAAATTA
AACTTCGGAACATTGGTTACCGGTTGGTCTACGAAGTTCGAGATGCTGAACTAATCGTTGGGATGTGTTTCCCGACTACT
CAAAAATTGAACAGATAA

Antitoxin

Protein

• Length: 83 a.a.
• Molecular weight: 9139.61 Da
• Isoelectric Point: 7.9696

>AT65319 WP_011215615.1 NZ_CP016872:c479344-479096 [Legionella pneumophila subsp. pneumophila]
MTNVIFAQVTASISELKKNPMATVSSGDGNPVVILNRNQPAFYCIPAKLYEKFMNKLEDIELNSIADSRKNNPVIKVKLD
EL

Nucleotide

• Length: 249 bp

>AT65319 NZ_CP016872:c479344-479096 [Legionella pneumophila subsp. pneumophila]
ATGACTAACGTTATTTTTGCACAGGTCACTGCCAGCATTTCTGAATTAAAAAAAAATCCAATGGCAACTGTTTCATCTGG
CGATGGCAATCCTGTAGTTATTTTAAATCGCAATCAACCTGCTTTTTATTGTATCCCAGCAAAGCTTTATGAAAAATTCA
TGAATAAACTTGAAGATATAGAGCTTAATAGCATTGCTGATTCAAGAAAAAATAATCCAGTTATTAAGGTAAAATTGGAT
GAGCTTTGA

Structures

Toxin

• AlphaFold DB: Q5WW71

Antitoxin

• AlphaFold DB: Q5WW72