Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yxiD-yxxD/-
Location 3554889..3555677 Replicon chromosome
Accession NZ_CP016395
Organism Bacillus velezensis strain M75

Toxin (Protein)


Gene name yxiD Uniprot ID -
Locus tag BBJ33_RS20320 Protein ID WP_079891856.1
Coordinates 3555336..3555677 (-) Length 114 a.a.

Antitoxin (Protein)


Gene name yxxD Uniprot ID -
Locus tag BBJ33_RS17290 Protein ID WP_014305975.1
Coordinates 3554889..3555326 (-) Length 146 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BBJ33_RS17255 3550417..3550953 + 537 WP_003151296.1 chromate resistance efflux protein ChrA -
BBJ33_RS17260 3550980..3551198 - 219 WP_003151295.1 hypothetical protein -
BBJ33_RS17265 3551195..3551740 - 546 WP_003151294.1 flavodoxin family protein -
BBJ33_RS17270 3551863..3552744 + 882 WP_003151293.1 LysR family transcriptional regulator -
BBJ33_RS17275 3552830..3553546 - 717 WP_069473605.1 endonuclease V -
BBJ33_RS17280 3553586..3554086 - 501 WP_015387596.1 hypothetical protein -
BBJ33_RS17285 3554278..3554718 - 441 WP_025649364.1 SMI1/KNR4 family protein -
BBJ33_RS17290 3554889..3555326 - 438 WP_014305975.1 SMI1/KNR4 family protein Antitoxin
BBJ33_RS20320 3555336..3555677 - 342 WP_079891856.1 HNH endonuclease Toxin
BBJ33_RS20325 3556296..3556634 - 339 Protein_3390 transposase -
BBJ33_RS20010 3557273..3557738 - 466 Protein_3391 DUF2004 domain-containing protein -
BBJ33_RS20100 3557740..3558322 - 583 Protein_3392 HNH endonuclease -
BBJ33_RS17310 3558435..3558740 - 306 WP_003151282.1 hypothetical protein -
BBJ33_RS17315 3558757..3560502 - 1746 WP_046341443.1 ribonuclease YeeF family protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 114 a.a.        Molecular weight: 13224.74 Da        Isoelectric Point: 9.6942

>T64549 WP_079891856.1 NZ_CP016395:c3555677-3555336 [Bacillus velezensis]
IKEALRNNNYEKLTPKETAKHRSKFTSSLKDRLIAEWEEKTNQKWPRYTEEVFDKHGEVARSIGQPYDAHHIIENNFGGP
HEWWNIHPAKYPDEHQAGIHGKGAPSGKLFPRR

Download         Length: 342 bp

>T64549 NZ_CP016395:c3555677-3555336 [Bacillus velezensis]
ATAAAAGAAGCTTTAAGAAATAATAACTATGAGAAATTAACACCAAAAGAAACAGCTAAGCATAGGAGCAAATTCACATC
AAGTTTGAAAGATAGATTGATTGCAGAATGGGAAGAAAAAACCAATCAAAAGTGGCCTAGATATACAGAAGAGGTTTTTG
ATAAGCATGGAGAAGTTGCCCGAAGTATTGGTCAACCGTACGATGCCCATCATATCATAGAGAACAACTTTGGTGGCCCT
CACGAATGGTGGAATATTCATCCGGCAAAATATCCGGATGAACACCAAGCGGGTATACATGGAAAGGGAGCACCATCAGG
AAAACTTTTTCCAAGGAGGTAA

Antitoxin


Download         Length: 146 a.a.        Molecular weight: 17050.05 Da        Isoelectric Point: 3.8675

>AT64549 WP_014305975.1 NZ_CP016395:c3555326-3554889 [Bacillus velezensis]
MAEFEFINHLENKTYKVPEEDILKAEQRMNVDIPNDLKQLYLEVGYGFIKGESDNAINRILGPGAVADIRLREGIFEFDP
DLDELYDDENKLIFFEVNEGVYISIDLRLANNPIFYFDTQIAESLEDFFKKFLNDNEYYIDLIED

Download         Length: 438 bp

>AT64549 NZ_CP016395:c3555326-3554889 [Bacillus velezensis]
ATGGCTGAATTTGAATTTATAAATCATTTAGAAAATAAAACATATAAGGTACCTGAAGAGGATATATTAAAAGCTGAACA
AAGAATGAACGTAGATATTCCAAATGATTTAAAACAATTATATTTAGAAGTCGGTTATGGTTTTATTAAAGGTGAAAGTG
ATAATGCAATTAATAGGATATTGGGGCCAGGGGCAGTAGCCGACATTAGACTAAGAGAAGGAATTTTTGAGTTTGACCCA
GATTTAGATGAACTTTATGATGATGAAAATAAACTTATTTTTTTTGAAGTAAACGAGGGTGTTTATATTTCTATAGATTT
ACGATTGGCAAATAATCCAATATTTTATTTTGACACTCAAATAGCTGAATCTTTAGAGGATTTTTTTAAAAAGTTCCTCA
ATGATAATGAATATTATATTGATTTAATTGAGGATTAG

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References