Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 500624..501260 Replicon chromosome
Accession NZ_CP015975
Organism Bacillus subtilis subsp. subtilis strain delta6

Toxin (Protein)


Gene name mazF Uniprot ID G4NU33
Locus tag A8O17_RS02570 Protein ID WP_003156187.1
Coordinates 500910..501260 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G4NU32
Locus tag A8O17_RS02565 Protein ID WP_003225183.1
Coordinates 500624..500905 (+) Length 94 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
A8O17_RS02545 496983..497582 - 600 WP_003246687.1 rhomboid family intramembrane serine protease -
A8O17_RS02550 497677..498042 + 366 WP_003234281.1 holo-ACP synthase -
A8O17_RS02555 498208..499224 + 1017 WP_003234282.1 outer membrane lipoprotein carrier protein LolA -
A8O17_RS02560 499339..500508 + 1170 WP_003234284.1 alanine racemase -
A8O17_RS02565 500624..500905 + 282 WP_003225183.1 type II toxin-antitoxin system antitoxin EndoAI Antitoxin
A8O17_RS02570 500910..501260 + 351 WP_003156187.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
A8O17_RS02575 501375..502199 + 825 WP_009966610.1 RsbT co-antagonist protein RsbRA -
A8O17_RS02580 502204..502569 + 366 WP_003225190.1 RsbT antagonist protein RsbS -
A8O17_RS02585 502573..502974 + 402 WP_003246640.1 serine/threonine-protein kinase RsbT -
A8O17_RS02590 502986..503993 + 1008 WP_003234295.1 phosphoserine phosphatase RsbU -
A8O17_RS02595 504055..504384 + 330 WP_003234298.1 anti-sigma factor antagonist RsbV -
A8O17_RS02600 504381..504863 + 483 WP_003234299.1 anti-sigma B factor RsbW -
A8O17_RS02605 504829..505617 + 789 WP_003246715.1 RNA polymerase sigma factor SigB -
A8O17_RS02610 505617..506216 + 600 WP_003246608.1 phosphoserine phosphatase RsbX -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(4-111)

Antitoxin

(12-45)


Sequences


Toxin        


Download         Length: 117 a.a.        Molecular weight: 12977.98 Da        Isoelectric Point: 4.8781

>T64016 WP_003156187.1 NZ_CP015975:500910-501260 [Bacillus subtilis subsp. subtilis]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF

Download         Length: 351 bp

>T64016 NZ_CP015975:500910-501260 [Bacillus subtilis subsp. subtilis]
TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGGGTGCGCCCGGT
TTTAGTGATCCAAAATGACATCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCTT
ACAAATCAGTTTGGCACTCATTGATTTTTAG

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10546.92 Da        Isoelectric Point: 6.4708

>AT64016 WP_003225183.1 NZ_CP015975:500624-500905 [Bacillus subtilis subsp. subtilis]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHFAEC
EAETTVERLVSGG

Download         Length: 282 bp

>AT64016 NZ_CP015975:500624-500905 [Bacillus subtilis subsp. subtilis]
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAACCTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGAACAACTCGTCACAACC
GTGATTTGATGAGACGCGGCTATATGGAAATGGCGAAAATCAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGC
GAGGCTGAAACGACAGTTGAGCGCTTAGTCAGCGGAGGATAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 4MDX
PDB 4ME7
PDB 1NE8


Antitoxin

Source ID Structure
PDB 4ME7
AlphaFold DB G4NU32

References