Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) /BrnT(toxin)
Location 3796394..3796904 Replicon chromosome
Accession NZ_CP014754
Organism Marinobacter sp. LQ44

Toxin (Protein)


Gene name - Uniprot ID A0A142FV29
Locus tag ASQ50_RS17465 Protein ID WP_058092344.1
Coordinates 3796641..3796904 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID A0A142FV28
Locus tag ASQ50_RS17460 Protein ID WP_058092345.1
Coordinates 3796394..3796651 (-) Length 86 a.a.

Genomic Context

ASQ50_RS17445ASQ50_RS20685ASQ50_RS17455ASQ50_RS17480ASQ50_RS17485ASQ50_RS17460ASQ50_RS17465ASQ50_RS17470
Location: 3792252..3793529 (1278 bp)
Type: Others
Protein ID: WP_058092347.1
Location: 3793880..3795631 (1752 bp)
Type: Others
Protein ID: WP_156510033.1
Location: 3795621..3796211 (591 bp)
Type: Others
Protein ID: WP_058092346.1
Location: 3797887..3799049 (1163 bp)
Type: Others
Protein ID: Protein_3460
Location: 3799218..3800543 (1326 bp)
Type: Others
Protein ID: WP_068351393.1
Location: 3796394..3796651 (258 bp)
Type: Antitoxin
Protein ID: WP_058092345.1
Location: 3796641..3796904 (264 bp)
Type: Toxin
Protein ID: WP_058092344.1
Location: 3797037..3797522 (486 bp)
Type: Others
Protein ID: WP_058092343.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
ASQ50_RS174453792252..3793529+1278WP_058092347.1MFS transporter-
ASQ50_RS206853793880..3795631+1752WP_156510033.1type VI secretion system PAAR protein-
ASQ50_RS174553795621..3796211+591WP_058092346.1DUF2931 family protein-
ASQ50_RS174603796394..3796651-258WP_058092345.1hypothetical proteinAntitoxin
ASQ50_RS174653796641..3796904-264WP_058092344.1BrnT family toxinToxin
ASQ50_RS174703797037..3797522-486WP_058092343.1shikimate kinase-
ASQ50_RS174803797887..3799049+1163Protein_3460IS3 family transposase-
ASQ50_RS174853799218..3800543+1326WP_068351393.1IS1182 family transposase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideProphage--3790774..38005439769


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Ribonuclease toxin, BrnT, of type II toxin-antitoxin system

(6-81)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10311.76 Da        Isoelectric Point: 8.4938

>T61742 WP_058092344.1 NZ_CP014754:c3796904-3796641 [Marinobacter sp. LQ44]
MGEFEFDEAKSQANLDKHGIDFVAAQRLWKDPYLLEIRAKSEDEQRFLLIGKIGEKHWSAVVTYRDARIRLISVRRSRKK
EVELYES

Download         Length: 264 bp

>T61742 NZ_CP014754:c3796904-3796641 [Marinobacter sp. LQ44]
ATGGGTGAATTTGAATTCGACGAAGCAAAAAGCCAGGCCAATCTGGATAAGCACGGTATTGATTTCGTTGCTGCACAGAG
GCTGTGGAAAGATCCATACCTGCTGGAGATCCGCGCAAAATCAGAGGATGAGCAGCGGTTTTTGCTAATCGGCAAGATTG
GTGAAAAGCACTGGTCGGCTGTCGTCACATACAGGGATGCTCGTATTCGTCTGATTTCAGTCAGGCGTTCCCGCAAGAAG
GAGGTTGAGCTCTATGAAAGCTAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 9938.17 Da        Isoelectric Point: 5.8992

>AT61742 WP_058092345.1 NZ_CP014754:c3796651-3796394 [Marinobacter sp. LQ44]
MKAKDFDKKFEEGQEDIIDDLDLSSARRVNQEQKRINVDFPAWVVESLDREAARIGVTRQSIIKVWLVERLQAESANTHE
PSRKR

Download         Length: 258 bp

>AT61742 NZ_CP014754:c3796651-3796394 [Marinobacter sp. LQ44]
ATGAAAGCTAAAGACTTCGACAAAAAATTTGAGGAAGGTCAGGAAGATATTATTGATGATCTGGACCTGTCCTCTGCTCG
CCGCGTTAATCAGGAACAAAAGCGAATCAACGTCGATTTCCCGGCTTGGGTTGTCGAGTCTTTGGATCGTGAGGCTGCGC
GCATTGGCGTTACCCGCCAATCAATCATCAAAGTGTGGCTGGTGGAGCGCCTTCAGGCAGAATCTGCTAACACACATGAG
CCTTCTCGGAAACGATAG

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A142FV29

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A142FV28

References