Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) yoeB-relB/YoeB-YefM
Location 659825..660327 Replicon chromosome
Accession NZ_CP014754
Organism Marinobacter sp. LQ44

Toxin (Protein)


Gene name yoeB Uniprot ID A0A142FMP5
Locus tag ASQ50_RS03135 Protein ID WP_058092925.1
Coordinates 660073..660327 (+) Length 85 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A142FMP4
Locus tag ASQ50_RS03130 Protein ID WP_058092924.1
Coordinates 659825..660076 (+) Length 84 a.a.

Genomic Context

ASQ50_RS03110ASQ50_RS03130ASQ50_RS03135ASQ50_RS03090ASQ50_RS03095ASQ50_RS03100ASQ50_RS03105ASQ50_RS03115ASQ50_RS03145ASQ50_RS03150ASQ50_RS03155ASQ50_RS03160
Location: 657231..658256 (1026 bp)
Type: Others
Protein ID: WP_068351341.1
Location: 659825..660076 (252 bp)
Type: Antitoxin
Protein ID: WP_058092924.1
Location: 660073..660327 (255 bp)
Type: Toxin
Protein ID: WP_058092925.1
Location: 655565..655828 (264 bp)
Type: Others
Protein ID: WP_058092927.1
Location: 655825..656067 (243 bp)
Type: Others
Protein ID: WP_058092928.1
Location: 656219..656653 (435 bp)
Type: Others
Protein ID: WP_058092929.1
Location: 656823..657110 (288 bp)
Type: Others
Protein ID: WP_058092930.1
Location: 658648..658881 (234 bp)
Type: Others
Protein ID: WP_058092921.1
Location: 661007..661762 (756 bp)
Type: Others
Protein ID: WP_058092926.1
Location: 661774..662682 (909 bp)
Type: Others
Protein ID: Protein_613
Location: 662770..663786 (1017 bp)
Type: Others
Protein ID: WP_058092803.1
Location: 663783..664772 (990 bp)
Type: Others
Protein ID: WP_058092802.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
ASQ50_RS03090655565..655828-264WP_058092927.1Txe/YoeB family addiction module toxin-
ASQ50_RS03095655825..656067-243WP_058092928.1type II toxin-antitoxin system Phd/YefM family antitoxin-
ASQ50_RS03100656219..656653-435WP_058092929.1hypothetical protein-
ASQ50_RS03105656823..657110-288WP_058092930.1hypothetical protein-
ASQ50_RS03110657231..658256+1026WP_068351341.1IS110 family transposase-
ASQ50_RS03115658648..658881-234WP_058092921.1hypothetical protein-
ASQ50_RS03130659825..660076+252WP_058092924.1type II toxin-antitoxin system prevent-host-death family antitoxinAntitoxin
ASQ50_RS03135660073..660327+255WP_058092925.1Txe/YoeB family addiction module toxinToxin
ASQ50_RS03145661007..661762-756WP_058092926.1IS21-like element ISSpu5 family helper ATPase IstB-
ASQ50_RS03150661774..662682-909Protein_613IS21 family transposase-
ASQ50_RS03155662770..663786-1017WP_058092803.1tyrosine-type recombinase/integrase-
ASQ50_RS03160663783..664772-990WP_058092802.1tyrosine-type recombinase/integrase-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideGenomic island--649475..66066211187
-insideIntegron--656219..6607584539


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(5-84)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-74)


Sequences

Toxin        


Download         Length: 85 a.a.        Molecular weight: 10222.75 Da        Isoelectric Point: 9.6072

>T61738 WP_058092925.1 NZ_CP014754:660073-660327 [Marinobacter sp. LQ44]
MKLIFSENAWEDYLYWQKTDKKILNRINKLINETKREPFEGVGKPEPLKHSLAGYWSRRINEEHRIVYKVTDDALLIAQL
RYHY

Download         Length: 255 bp

>T61738 NZ_CP014754:660073-660327 [Marinobacter sp. LQ44]
ATGAAACTCATCTTCTCCGAGAACGCCTGGGAAGACTATCTGTACTGGCAGAAAACCGACAAAAAGATTCTTAACCGAAT
CAACAAGCTGATCAATGAGACCAAACGAGAACCGTTCGAAGGTGTTGGCAAACCAGAGCCCCTCAAACACAGCCTCGCCG
GGTACTGGTCTCGCCGGATCAACGAAGAACACCGAATAGTTTACAAAGTCACGGATGACGCTTTGCTTATCGCCCAGCTC
CGGTATCACTACTGA

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9285.50 Da        Isoelectric Point: 4.4750

>AT61738 WP_058092924.1 NZ_CP014754:659825-660076 [Marinobacter sp. LQ44]
MDAISYTAARTNLAKTMEQVCEDHSPVIITRSKSQSVVMISLEDYEALQETAYLLRSPKNARRLLESVAELEQGGGQEKE
LLE

Download         Length: 252 bp

>AT61738 NZ_CP014754:659825-660076 [Marinobacter sp. LQ44]
ATGGATGCCATTAGCTACACAGCCGCTAGAACCAATCTAGCAAAAACCATGGAGCAGGTCTGTGAAGACCATTCCCCTGT
GATCATCACCCGGAGCAAGTCGCAGTCCGTGGTAATGATCTCCCTAGAGGACTACGAGGCGCTGCAAGAGACTGCATACC
TTCTGCGCTCACCAAAAAACGCACGGCGTTTGCTGGAATCCGTTGCCGAGCTGGAGCAAGGCGGTGGTCAAGAAAAGGAA
CTTCTTGAATGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A142FMP5

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A142FMP4

References