61213

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) TsaAT/-
Location 883315..883792 Replicon chromosome
Accession NZ_CP014444
Organism Staphylococcus aureus strain USA300-SUR24

Toxin (Protein)


Gene name TsaT Uniprot ID Q2G005
Locus tag AYM37_RS04495 Protein ID WP_000052078.1
Coordinates 883315..883503 (-) Length 63 a.a.

Antitoxin (Protein)


Gene name TsaA Uniprot ID T1Y6P8
Locus tag AYM37_RS04500 Protein ID WP_001059690.1
Coordinates 883532..883792 (-) Length 87 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AYM37_RS04465 879356..879826 + 471 WP_000824472.1 hypothetical protein -
AYM37_RS04470 880167..880853 + 687 WP_001548082.1 thermonuclease family protein -
AYM37_RS04475 881210..881410 + 201 WP_001059082.1 cold-shock protein -
AYM37_RS04480 881906..882124 - 219 WP_000005886.1 hypothetical protein -
AYM37_RS04485 882186..882470 - 285 WP_001004395.1 hypothetical protein -
AYM37_RS04490 882558..883127 - 570 WP_001106654.1 hypothetical protein -
AYM37_RS04495 883315..883503 - 189 WP_000052078.1 hypothetical protein Toxin
AYM37_RS04500 883532..883792 - 261 WP_001059690.1 hypothetical protein Antitoxin
AYM37_RS04505 884133..884336 + 204 WP_000145163.1 sterile alpha motif-like domain-containing protein -
AYM37_RS04510 884333..884569 - 237 WP_000368687.1 hypothetical protein -
AYM37_RS04515 884794..885375 + 582 WP_001140686.1 phosphoglycerate mutase family protein -
AYM37_RS04520 885448..886065 - 618 WP_000255561.1 LysE/ArgO family amino acid transporter -
AYM37_RS04525 886220..886714 - 495 WP_000569884.1 GNAT family N-acetyltransferase -
AYM37_RS04530 887113..887535 - 423 WP_000974460.1 organic hydroperoxide resistance protein -
AYM37_RS04535 887683..888399 + 717 WP_000150017.1 type I 3-dehydroquinate dehydratase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin HigB-like

(13-107)

Antitoxin

HigA2-like, helix-turn-helix domain

(9-87)


Sequences

Toxin        


Download         Length: 63 a.a.        Molecular weight: 7172.84 Da        Isoelectric Point: 9.9971

>T61213 WP_000052078.1 NZ_CP014444:c883503-883315 [Staphylococcus aureus]
MSLHFAILFWLALIFLVAATFILVLMKKTSKESKKESYLSFTVILYIFGFAILIYTFIFGVL

Download         Length: 189 bp

>T61213 NZ_CP014444:c883503-883315 [Staphylococcus aureus]
ATGTCTTTACATTTTGCAATTCTGTTTTGGCTAGCATTAATTTTCTTAGTTGCCGCTACGTTTATACTCGTATTAATGAA
AAAAACTAGCAAAGAATCTAAAAAAGAGTCCTATTTAAGTTTCACTGTCATTCTCTATATTTTTGGATTCGCTATATTAA
TATACACATTTATATTTGGTGTGCTATAA

Antitoxin


Download         Length: 87 a.a.        Molecular weight: 9940.09 Da        Isoelectric Point: 4.0624

>AT61213 WP_001059690.1 NZ_CP014444:c883792-883532 [Staphylococcus aureus]
MNNILLNAINIVITTTFVIFNILITYNKDLDDLCWLLPGIIICGVILIVSFTIAMITKNWLSEILFFINIVLVLYYIYPI
FYSFIG

Download         Length: 261 bp

>AT61213 NZ_CP014444:c883792-883532 [Staphylococcus aureus]
ATGAATAACATTTTGTTAAATGCTATCAATATAGTTATTACTACCACTTTTGTTATCTTTAATATTTTAATCACATATAA
TAAAGATTTAGATGATTTATGTTGGCTCCTGCCTGGTATTATCATTTGTGGTGTGATACTCATCGTATCCTTTACCATTG
CAATGATAACTAAAAACTGGTTAAGTGAAATATTATTTTTTATAAATATCGTACTCGTTCTCTATTACATTTATCCTATT
TTTTATAGTTTTATAGGTTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0D6HZ40

Antitoxin

Source ID Structure
AlphaFold DB A0A0E0VN56

References