Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YafQ-DinJ |
| Location | 2081139..2081679 | Replicon | chromosome |
| Accession | NZ_CP014231 | ||
| Organism | Leptotrichia sp. oral taxon 847 strain F0260 | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | A0A0X8JVV3 |
| Locus tag | AXF11_RS09840 | Protein ID | WP_068157782.1 |
| Coordinates | 2081404..2081679 (+) | Length | 92 a.a. |
Antitoxin (Protein)
| Gene name | relB | Uniprot ID | A0A0X8JVU0 |
| Locus tag | AXF11_RS09835 | Protein ID | WP_068157777.1 |
| Coordinates | 2081139..2081414 (+) | Length | 92 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | flank | IS/Tn | - | - | 2083540..2084001 | 461 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 92 a.a. Molecular weight: 10653.45 Da Isoelectric Point: 9.5972
>T60432 WP_068157782.1 NZ_CP014231:2081404-2081679 [Leptotrichia sp. oral taxon 847]
MAYKVKFTGQFRKDLKSAKKQGKDLNKLFDVIKVLEKGKKLEDKYKDHSLSGKYSGTRECHVEPDWLLVYEIIDDVLMLV
LYRLGSHSELF
MAYKVKFTGQFRKDLKSAKKQGKDLNKLFDVIKVLEKGKKLEDKYKDHSLSGKYSGTRECHVEPDWLLVYEIIDDVLMLV
LYRLGSHSELF
Download Length: 276 bp
>T60432 NZ_CP014231:2081404-2081679 [Leptotrichia sp. oral taxon 847]
TTGGCGTATAAAGTTAAGTTTACAGGACAATTTAGAAAAGATTTAAAATCGGCAAAAAAACAAGGAAAAGATCTTAATAA
ACTCTTTGATGTGATAAAAGTATTGGAAAAAGGTAAAAAACTTGAAGATAAATATAAAGATCATAGTTTATCAGGAAAAT
ATAGTGGAACAAGAGAATGTCATGTCGAGCCAGATTGGCTATTAGTTTATGAAATAATAGATGATGTATTAATGCTCGTA
TTATACAGATTAGGTTCACATTCAGAACTATTTTAA
TTGGCGTATAAAGTTAAGTTTACAGGACAATTTAGAAAAGATTTAAAATCGGCAAAAAAACAAGGAAAAGATCTTAATAA
ACTCTTTGATGTGATAAAAGTATTGGAAAAAGGTAAAAAACTTGAAGATAAATATAAAGATCATAGTTTATCAGGAAAAT
ATAGTGGAACAAGAGAATGTCATGTCGAGCCAGATTGGCTATTAGTTTATGAAATAATAGATGATGTATTAATGCTCGTA
TTATACAGATTAGGTTCACATTCAGAACTATTTTAA
Antitoxin
Download Length: 92 a.a. Molecular weight: 10335.78 Da Isoelectric Point: 4.9337
>AT60432 WP_068157777.1 NZ_CP014231:2081139-2081414 [Leptotrichia sp. oral taxon 847]
MTNANLSIRVDKDTKEKANELFNRLGLTMTTAVNIFLKTAIRENGIPFELKLEEEPNETTIRAIEEGRRIAKDDSIKGYD
NIEELRKALGV
MTNANLSIRVDKDTKEKANELFNRLGLTMTTAVNIFLKTAIRENGIPFELKLEEEPNETTIRAIEEGRRIAKDDSIKGYD
NIEELRKALGV
Download Length: 276 bp
>AT60432 NZ_CP014231:2081139-2081414 [Leptotrichia sp. oral taxon 847]
ATGACAAATGCTAATTTAAGTATTAGAGTTGATAAAGATACGAAAGAAAAAGCGAATGAACTATTTAACAGACTTGGGCT
AACAATGACGACAGCTGTAAATATATTTTTGAAAACTGCGATTAGAGAAAATGGGATTCCTTTTGAATTAAAGTTGGAAG
AAGAGCCGAATGAAACAACGATACGGGCAATTGAAGAAGGAAGAAGAATTGCAAAAGATGACAGCATAAAAGGATATGAC
AATATAGAGGAGTTGAGAAAAGCACTTGGCGTATAA
ATGACAAATGCTAATTTAAGTATTAGAGTTGATAAAGATACGAAAGAAAAAGCGAATGAACTATTTAACAGACTTGGGCT
AACAATGACGACAGCTGTAAATATATTTTTGAAAACTGCGATTAGAGAAAATGGGATTCCTTTTGAATTAAAGTTGGAAG
AAGAGCCGAATGAAACAACGATACGGGCAATTGAAGAAGGAAGAAGAATTGCAAAAGATGACAGCATAAAAGGATATGAC
AATATAGAGGAGTTGAGAAAAGCACTTGGCGTATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
Structures
Toxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0X8JVV3 |
Antitoxin
| Source | ID | Structure |
|---|---|---|
| AlphaFold DB | A0A0X8JVU0 |