Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) /RES-TIGR02293
Location 3519676..3520589 Replicon chromosome
Accession NZ_CP014007
Organism Kosakonia oryzae strain Ola 51

Toxin (Protein)


Gene name - Uniprot ID -
Locus tag AWR26_RS16565 Protein ID WP_064567529.1
Coordinates 3520116..3520589 (+) Length 158 a.a.

Antitoxin (Protein)


Gene name - Uniprot ID -
Locus tag AWR26_RS16560 Protein ID WP_064567527.1
Coordinates 3519676..3520119 (+) Length 148 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
AWR26_RS16545 3515738..3517459 + 1722 WP_064567523.1 cysteine/glutathione ABC transporter ATP-binding protein/permease CydC -
AWR26_RS16550 3517566..3518270 + 705 WP_064567525.1 leucyl/phenylalanyl-tRNA--protein transferase -
AWR26_RS16555 3518554..3518772 + 219 WP_001040187.1 translation initiation factor IF-1 -
AWR26_RS16560 3519676..3520119 + 444 WP_064567527.1 DUF2384 domain-containing protein Antitoxin
AWR26_RS16565 3520116..3520589 + 474 WP_064567529.1 RES domain-containing protein Toxin
AWR26_RS16570 3520802..3521980 - 1179 WP_064567531.1 acetyl-CoA C-acetyltransferase -
AWR26_RS16575 3521962..3522633 - 672 WP_064567533.1 CoA transferase subunit B -
AWR26_RS16580 3522633..3523289 - 657 WP_064567535.1 acetate CoA-transferase subunit alpha -
AWR26_RS16585 3523378..3523677 - 300 WP_064567537.1 hypothetical protein -
AWR26_RS16590 3523677..3525017 - 1341 WP_064567539.1 DUF1446 domain-containing protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(3-148)

Antitoxin

(94-144)


Sequences


Toxin        


Download         Length: 158 a.a.        Molecular weight: 17431.84 Da        Isoelectric Point: 6.3244

>T59839 WP_064567529.1 NZ_CP014007:3520116-3520589 [Kosakonia oryzae]
VIFYRLVSRRYASEAWTGSGANQYGGRWNHKGHPAVYVASSVSLAALEMLVHVHSDTVLNQYGLFSINIPDKEIEYLDKQ
WLPPDWQENPAPLSTMDLGTAWLEANSAVALVLPSCVIPLENNALLNPLHPGFSKLLKSVQALPFSFDSRLVSQAER

Download         Length: 474 bp

>T59839 NZ_CP014007:3520116-3520589 [Kosakonia oryzae]
GTGATTTTTTATCGCCTTGTTTCGCGCCGCTACGCCAGCGAAGCCTGGACCGGCAGCGGTGCGAATCAATACGGCGGCAG
ATGGAATCACAAAGGGCATCCGGCGGTTTATGTTGCCTCATCCGTTTCGCTCGCCGCGCTGGAAATGCTGGTACATGTGC
ACAGCGACACGGTTCTAAACCAGTACGGCCTGTTCAGTATCAACATCCCCGATAAAGAGATCGAGTATCTGGATAAACAG
TGGCTGCCACCGGACTGGCAGGAAAACCCGGCTCCGCTTTCGACGATGGATCTGGGAACCGCCTGGCTGGAAGCGAACAG
CGCCGTCGCGCTGGTGCTGCCCTCCTGCGTCATCCCGCTGGAAAATAACGCCCTTTTGAATCCACTGCATCCGGGGTTTA
GCAAGCTATTAAAATCGGTACAAGCGCTTCCTTTTTCGTTCGATAGCCGCCTGGTCAGCCAGGCGGAAAGATGA

Antitoxin


Download         Length: 148 a.a.        Molecular weight: 16428.87 Da        Isoelectric Point: 8.6775

>AT59839 WP_064567527.1 NZ_CP014007:3519676-3520119 [Kosakonia oryzae]
MRAWSPEQKSIENALWRFAGFPANRGLKLVQMLNEGLPVSILDNIHEWTEMSRSDILRVTGINERNVARRKSAGRTLTPE
ESERIARLVRVIDAAVQFFGSKKMAYEWLESPVRGLGNVAPISLIATESGALEVTDLIGRLEHGVFA

Download         Length: 444 bp

>AT59839 NZ_CP014007:3519676-3520119 [Kosakonia oryzae]
ATGAGAGCCTGGAGCCCGGAACAAAAGTCGATTGAAAACGCGCTCTGGCGTTTTGCCGGCTTCCCCGCCAACAGGGGACT
AAAACTTGTTCAGATGCTGAATGAAGGTTTACCCGTCAGCATTCTGGATAACATTCATGAATGGACGGAAATGTCCCGTT
CCGACATTTTGCGTGTCACCGGTATTAACGAGCGTAATGTTGCCCGCCGTAAGAGCGCGGGGCGCACCTTAACGCCGGAA
GAGAGCGAGCGGATCGCGCGTTTAGTGCGGGTAATTGATGCCGCCGTACAGTTTTTCGGCAGCAAAAAGATGGCGTACGA
GTGGCTGGAATCGCCAGTCAGAGGGCTGGGTAACGTTGCGCCGATTTCGCTGATTGCGACAGAGAGCGGCGCGCTGGAAG
TCACCGATCTGATCGGCCGCCTTGAACACGGAGTGTTTGCGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure


Antitoxin

Source ID Structure

References