Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | /RES-TIGR02293 |
Location | 3519676..3520589 | Replicon | chromosome |
Accession | NZ_CP014007 | ||
Organism | Kosakonia oryzae strain Ola 51 |
Toxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | AWR26_RS16565 | Protein ID | WP_064567529.1 |
Coordinates | 3520116..3520589 (+) | Length | 158 a.a. |
Antitoxin (Protein)
Gene name | - | Uniprot ID | - |
Locus tag | AWR26_RS16560 | Protein ID | WP_064567527.1 |
Coordinates | 3519676..3520119 (+) | Length | 148 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
AWR26_RS16545 | 3515738..3517459 | + | 1722 | WP_064567523.1 | cysteine/glutathione ABC transporter ATP-binding protein/permease CydC | - |
AWR26_RS16550 | 3517566..3518270 | + | 705 | WP_064567525.1 | leucyl/phenylalanyl-tRNA--protein transferase | - |
AWR26_RS16555 | 3518554..3518772 | + | 219 | WP_001040187.1 | translation initiation factor IF-1 | - |
AWR26_RS16560 | 3519676..3520119 | + | 444 | WP_064567527.1 | DUF2384 domain-containing protein | Antitoxin |
AWR26_RS16565 | 3520116..3520589 | + | 474 | WP_064567529.1 | RES domain-containing protein | Toxin |
AWR26_RS16570 | 3520802..3521980 | - | 1179 | WP_064567531.1 | acetyl-CoA C-acetyltransferase | - |
AWR26_RS16575 | 3521962..3522633 | - | 672 | WP_064567533.1 | CoA transferase subunit B | - |
AWR26_RS16580 | 3522633..3523289 | - | 657 | WP_064567535.1 | acetate CoA-transferase subunit alpha | - |
AWR26_RS16585 | 3523378..3523677 | - | 300 | WP_064567537.1 | hypothetical protein | - |
AWR26_RS16590 | 3523677..3525017 | - | 1341 | WP_064567539.1 | DUF1446 domain-containing protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 158 a.a. Molecular weight: 17431.84 Da Isoelectric Point: 6.3244
>T59839 WP_064567529.1 NZ_CP014007:3520116-3520589 [Kosakonia oryzae]
VIFYRLVSRRYASEAWTGSGANQYGGRWNHKGHPAVYVASSVSLAALEMLVHVHSDTVLNQYGLFSINIPDKEIEYLDKQ
WLPPDWQENPAPLSTMDLGTAWLEANSAVALVLPSCVIPLENNALLNPLHPGFSKLLKSVQALPFSFDSRLVSQAER
VIFYRLVSRRYASEAWTGSGANQYGGRWNHKGHPAVYVASSVSLAALEMLVHVHSDTVLNQYGLFSINIPDKEIEYLDKQ
WLPPDWQENPAPLSTMDLGTAWLEANSAVALVLPSCVIPLENNALLNPLHPGFSKLLKSVQALPFSFDSRLVSQAER
Download Length: 474 bp
>T59839 NZ_CP014007:3520116-3520589 [Kosakonia oryzae]
GTGATTTTTTATCGCCTTGTTTCGCGCCGCTACGCCAGCGAAGCCTGGACCGGCAGCGGTGCGAATCAATACGGCGGCAG
ATGGAATCACAAAGGGCATCCGGCGGTTTATGTTGCCTCATCCGTTTCGCTCGCCGCGCTGGAAATGCTGGTACATGTGC
ACAGCGACACGGTTCTAAACCAGTACGGCCTGTTCAGTATCAACATCCCCGATAAAGAGATCGAGTATCTGGATAAACAG
TGGCTGCCACCGGACTGGCAGGAAAACCCGGCTCCGCTTTCGACGATGGATCTGGGAACCGCCTGGCTGGAAGCGAACAG
CGCCGTCGCGCTGGTGCTGCCCTCCTGCGTCATCCCGCTGGAAAATAACGCCCTTTTGAATCCACTGCATCCGGGGTTTA
GCAAGCTATTAAAATCGGTACAAGCGCTTCCTTTTTCGTTCGATAGCCGCCTGGTCAGCCAGGCGGAAAGATGA
GTGATTTTTTATCGCCTTGTTTCGCGCCGCTACGCCAGCGAAGCCTGGACCGGCAGCGGTGCGAATCAATACGGCGGCAG
ATGGAATCACAAAGGGCATCCGGCGGTTTATGTTGCCTCATCCGTTTCGCTCGCCGCGCTGGAAATGCTGGTACATGTGC
ACAGCGACACGGTTCTAAACCAGTACGGCCTGTTCAGTATCAACATCCCCGATAAAGAGATCGAGTATCTGGATAAACAG
TGGCTGCCACCGGACTGGCAGGAAAACCCGGCTCCGCTTTCGACGATGGATCTGGGAACCGCCTGGCTGGAAGCGAACAG
CGCCGTCGCGCTGGTGCTGCCCTCCTGCGTCATCCCGCTGGAAAATAACGCCCTTTTGAATCCACTGCATCCGGGGTTTA
GCAAGCTATTAAAATCGGTACAAGCGCTTCCTTTTTCGTTCGATAGCCGCCTGGTCAGCCAGGCGGAAAGATGA
Antitoxin
Download Length: 148 a.a. Molecular weight: 16428.87 Da Isoelectric Point: 8.6775
>AT59839 WP_064567527.1 NZ_CP014007:3519676-3520119 [Kosakonia oryzae]
MRAWSPEQKSIENALWRFAGFPANRGLKLVQMLNEGLPVSILDNIHEWTEMSRSDILRVTGINERNVARRKSAGRTLTPE
ESERIARLVRVIDAAVQFFGSKKMAYEWLESPVRGLGNVAPISLIATESGALEVTDLIGRLEHGVFA
MRAWSPEQKSIENALWRFAGFPANRGLKLVQMLNEGLPVSILDNIHEWTEMSRSDILRVTGINERNVARRKSAGRTLTPE
ESERIARLVRVIDAAVQFFGSKKMAYEWLESPVRGLGNVAPISLIATESGALEVTDLIGRLEHGVFA
Download Length: 444 bp
>AT59839 NZ_CP014007:3519676-3520119 [Kosakonia oryzae]
ATGAGAGCCTGGAGCCCGGAACAAAAGTCGATTGAAAACGCGCTCTGGCGTTTTGCCGGCTTCCCCGCCAACAGGGGACT
AAAACTTGTTCAGATGCTGAATGAAGGTTTACCCGTCAGCATTCTGGATAACATTCATGAATGGACGGAAATGTCCCGTT
CCGACATTTTGCGTGTCACCGGTATTAACGAGCGTAATGTTGCCCGCCGTAAGAGCGCGGGGCGCACCTTAACGCCGGAA
GAGAGCGAGCGGATCGCGCGTTTAGTGCGGGTAATTGATGCCGCCGTACAGTTTTTCGGCAGCAAAAAGATGGCGTACGA
GTGGCTGGAATCGCCAGTCAGAGGGCTGGGTAACGTTGCGCCGATTTCGCTGATTGCGACAGAGAGCGGCGCGCTGGAAG
TCACCGATCTGATCGGCCGCCTTGAACACGGAGTGTTTGCGTGA
ATGAGAGCCTGGAGCCCGGAACAAAAGTCGATTGAAAACGCGCTCTGGCGTTTTGCCGGCTTCCCCGCCAACAGGGGACT
AAAACTTGTTCAGATGCTGAATGAAGGTTTACCCGTCAGCATTCTGGATAACATTCATGAATGGACGGAAATGTCCCGTT
CCGACATTTTGCGTGTCACCGGTATTAACGAGCGTAATGTTGCCCGCCGTAAGAGCGCGGGGCGCACCTTAACGCCGGAA
GAGAGCGAGCGGATCGCGCGTTTAGTGCGGGTAATTGATGCCGCCGTACAGTTTTTCGGCAGCAAAAAGATGGCGTACGA
GTGGCTGGAATCGCCAGTCAGAGGGCTGGGTAACGTTGCGCCGATTTCGCTGATTGCGACAGAGAGCGGCGCGCTGGAAG
TCACCGATCTGATCGGCCGCCTTGAACACGGAGTGTTTGCGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Structures
Toxin
Source | ID | Structure |
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Antitoxin
Source | ID | Structure |
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