59190

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 427749..428099 Replicon chromosome
Accession NZ_CP013677
Organism Xanthomonas oryzae pv. oryzae strain PXO524

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag ATY47_RS02030 Protein ID WP_011257368.1
Coordinates 427965..428099 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag ATY47_RS02025 Protein ID WP_011407410.1
Coordinates 427749..427901 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ATY47_RS02000 424029..424712 - 684 WP_011257363.1 dTMP kinase -
ATY47_RS02005 425192..425488 - 297 WP_012446308.1 hypothetical protein -
ATY47_RS02010 425495..425734 - 240 WP_011257365.1 hypothetical protein -
ATY47_RS02015 425731..426396 - 666 WP_069959695.1 hypothetical protein -
ATY47_RS02020 426718..427641 + 924 WP_011407409.1 arginase -
ATY47_RS02025 427749..427901 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
ATY47_RS02030 427965..428099 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
ATY47_RS02035 428340..428549 + 210 WP_011407411.1 CsbD family protein -
ATY47_RS02040 428718..430007 + 1290 WP_069959696.1 tryptophan--tRNA ligase -
ATY47_RS02045 430060..431082 + 1023 WP_075240574.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T59190 WP_011257368.1 NZ_CP013677:427965-428099 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T59190 NZ_CP013677:427965-428099 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT59190 WP_011407410.1 NZ_CP013677:427749-427901 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT59190 NZ_CP013677:427749-427901 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References