59180

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 4739898..4740248 Replicon chromosome
Accession NZ_CP013674
Organism Xanthomonas oryzae pv. oryzae strain PXO211

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag ATY44_RS22360 Protein ID WP_011257368.1
Coordinates 4739898..4740032 (-) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag ATY44_RS22365 Protein ID WP_011407410.1
Coordinates 4740096..4740248 (-) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ATY44_RS22345 4736912..4737934 - 1023 WP_075240574.1 MBL fold metallo-hydrolase -
ATY44_RS22350 4737987..4739276 - 1290 WP_011257370.1 tryptophan--tRNA ligase -
ATY44_RS22355 4739445..4739654 - 210 WP_011407411.1 CsbD family protein -
ATY44_RS22360 4739898..4740032 - 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
ATY44_RS22365 4740096..4740248 - 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
ATY44_RS22370 4740356..4741279 - 924 WP_011407409.1 arginase -
ATY44_RS22375 4741601..4742275 + 675 WP_011257366.1 hypothetical protein -
ATY44_RS22380 4742272..4742511 + 240 WP_011257365.1 hypothetical protein -
ATY44_RS22385 4742518..4742814 + 297 WP_012446308.1 hypothetical protein -
ATY44_RS22390 4743294..4743977 + 684 WP_011257363.1 dTMP kinase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T59180 WP_011257368.1 NZ_CP013674:c4740032-4739898 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T59180 NZ_CP013674:c4740032-4739898 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT59180 WP_011407410.1 NZ_CP013674:c4740248-4740096 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT59180 NZ_CP013674:c4740248-4740096 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References