59171

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 424262..424612 Replicon chromosome
Accession NZ_CP013670
Organism Xanthomonas oryzae pv. oryzae strain PXO71

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag ATY42_RS02010 Protein ID WP_011257368.1
Coordinates 424478..424612 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag ATY42_RS02005 Protein ID WP_011407410.1
Coordinates 424262..424414 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ATY42_RS01980 420542..421225 - 684 WP_011257363.1 dTMP kinase -
ATY42_RS01985 421705..422001 - 297 WP_012446308.1 hypothetical protein -
ATY42_RS01990 422008..422247 - 240 WP_011257365.1 hypothetical protein -
ATY42_RS01995 422244..422909 - 666 WP_069959695.1 hypothetical protein -
ATY42_RS02000 423231..424154 + 924 WP_011407409.1 arginase -
ATY42_RS02005 424262..424414 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
ATY42_RS02010 424478..424612 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
ATY42_RS02015 424853..425062 + 210 WP_011407411.1 CsbD family protein -
ATY42_RS02020 425231..426520 + 1290 WP_069959696.1 tryptophan--tRNA ligase -
ATY42_RS02025 426573..427595 + 1023 WP_075240574.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T59171 WP_011257368.1 NZ_CP013670:424478-424612 [Xanthomonas oryzae pv. oryzae]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T59171 NZ_CP013670:424478-424612 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGTGCAATTGTGCTGCTCGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT59171 WP_011407410.1 NZ_CP013670:424262-424414 [Xanthomonas oryzae pv. oryzae]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT59171 NZ_CP013670:424262-424414 [Xanthomonas oryzae pv. oryzae]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References