Detailed information of TA system TA057535

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): mazEF/MazF(toxin)
• Location: 2056782..2057311
• Replicon: chromosome
• Accession: NZ_CP012972
• Organism: Staphylococcus aureus strain ST20130938

Toxin (Protein)

• Gene name: mazF
• Uniprot ID: -
• Locus tag: SAST38_RS10295
• Protein ID: WP_000621175.1
• Coordinates: 2056782..2057144 (-)
• Length: 121 a.a.

Antitoxin (Protein)

• Gene name: mazE
• Uniprot ID: T1YCG8
• Locus tag: SAST38_RS10300
• Protein ID: WP_000948331.1
• Coordinates: 2057141..2057311 (-)
• Length: 57 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
SAST38_RS10270	2053761..2054531	-	771	WP_001041107.1	RNA polymerase sigma factor SigB	-
SAST38_RS10275	2054506..2054985	-	480	WP_001190829.1	anti-sigma B factor RsbW	-
SAST38_RS10280	2054987..2055313	-	327	WP_001052491.1	anti-sigma factor antagonist	-
SAST38_RS10285	2055432..2056433	-	1002	WP_000390829.1	PP2C family protein-serine/threonine phosphatase	-
SAST38_RS10295	2056782..2057144	-	363	WP_000621175.1	type II toxin-antitoxin system PemK/MazF family toxin	Toxin
SAST38_RS10300	2057141..2057311	-	171	WP_000948331.1	type II toxin-antitoxin system antitoxin MazE	Antitoxin
SAST38_RS10305	2057396..2058544	-	1149	WP_000130547.1	alanine racemase	-
SAST38_RS10310	2058610..2058969	-	360	WP_000581202.1	holo-ACP synthase	-
SAST38_RS10315	2058973..2059464	-	492	WP_001205912.1	PH domain-containing protein	-
SAST38_RS10320	2059451..2061034	-	1584	WP_001294620.1	PH domain-containing protein	-
SAST38_RS10325	2061027..2061506	-	480	WP_001287079.1	hypothetical protein	-
SAST38_RS10330	2061715..2062275	-	561	WP_001092409.1	K(+)-transporting ATPase subunit C	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• mRNA interferase PemK-like (3-110)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 121 a.a.
• Molecular weight: 13441.69 Da
• Isoelectric Point: 10.1654

>T57535 WP_000621175.1 NZ_CP012972:c2057144-2056782 [Staphylococcus aureus]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN

Nucleotide

• Length: 363 bp

>T57535 NZ_CP012972:c2057144-2056782 [Staphylococcus aureus]
ATGATTAGACGAGGAGATGTTTATTTAGCAGATTTATCACCAGTACAGGGATCTGAACAAGGGGGAGTCAGACCTGTAGT
CATAATTCAAAATGATACTGGTAATAAATATAGTCCTACAGTTATTGTTGCGGCAATAACTGGTAGGATTAATAAAGCGA
AAATACCGACACATGTAGAGATTGAAAAGAAAAAGTATAAATTGGATAAAGACTCAGTTATATTATTAGAACAAATTCGT
ACACTTGATAAAAAACGATTGAAAGAAAAACTGACGTACTTATCCGATGATAAAATGAAAGAAGTAGATAATGCACTAAT
GATTAGTTTAGGGCTGAATGCAGTAGCTCACCAGAAAAATTAG

Antitoxin

Protein

• Length: 57 a.a.
• Molecular weight: 6251.78 Da
• Isoelectric Point: 3.8305

>AT57535 WP_000948331.1 NZ_CP012972:c2057311-2057141 [Staphylococcus aureus]
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE

Nucleotide

• Length: 171 bp

>AT57535 NZ_CP012972:c2057311-2057141 [Staphylococcus aureus]
ATGTTATCTTTTAGTCAAAATAGAAGTCATAGCTTAGAACAATCTTTAAAAGAAGGATATTCACAAATGGCTGATTTAAA
TCTCTCCCTAGCGAACGAAGCTTTTCCGATAGAGTGTGAAGCATGCGATTGCAACGAAACATATTTATCTTCTAATTCAA
CGAATGAATGA

Structures

Antitoxin

• AlphaFold DB: A0A0E0VRZ1