Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/Txe-YefM
Location 218863..219365 Replicon chromosome
Accession NZ_CP011994
Organism Ectothiorhodospira sp. BSL-9

Toxin (Protein)


Gene name relE Uniprot ID A0A166ZWB6
Locus tag ECTOBSL9_RS01055 Protein ID WP_063463503.1
Coordinates 218863..219126 (-) Length 88 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID A0A166ZWC8
Locus tag ECTOBSL9_RS01060 Protein ID WP_063463504.1
Coordinates 219123..219365 (-) Length 81 a.a.

Genomic Context

ECTOBSL9_RS01045ECTOBSL9_RS01030ECTOBSL9_RS01035ECTOBSL9_RS01040ECTOBSL9_RS01050ECTOBSL9_RS01055ECTOBSL9_RS01060ECTOBSL9_RS01065ECTOBSL9_RS01070ECTOBSL9_RS01075
Location: 217971..218384 (414 bp)
Type: Others
Protein ID: WP_063463501.1
Location: 214501..215517 (1017 bp)
Type: Others
Protein ID: WP_063463498.1
Location: 215565..216059 (495 bp)
Type: Others
Protein ID: WP_063463499.1
Location: 216062..217756 (1695 bp)
Type: Others
Protein ID: WP_063463500.1
Location: 218445..218702 (258 bp)
Type: Others
Protein ID: WP_082829661.1
Location: 218863..219126 (264 bp)
Type: Toxin
Protein ID: WP_063463503.1
Location: 219123..219365 (243 bp)
Type: Antitoxin
Protein ID: WP_063463504.1
Location: 219698..222124 (2427 bp)
Type: Others
Protein ID: WP_063463505.1
Location: 222121..223125 (1005 bp)
Type: Others
Protein ID: WP_063463506.1
Location: 223122..224162 (1041 bp)
Type: Others
Protein ID: WP_082829662.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
ECTOBSL9_RS01030214501..215517-1017WP_063463498.1ketol-acid reductoisomerase-
ECTOBSL9_RS01035215565..216059-495WP_063463499.1acetolactate synthase small subunit-
ECTOBSL9_RS01040216062..217756-1695WP_063463500.1acetolactate synthase 3 large subunit-
ECTOBSL9_RS01045217971..218384+414WP_063463501.1YchJ family protein-
ECTOBSL9_RS01050218445..218702-258WP_082829661.1YgiT-type zinc finger protein-
ECTOBSL9_RS01055218863..219126-264WP_063463503.1Txe/YoeB family addiction module toxinToxin
ECTOBSL9_RS01060219123..219365-243WP_063463504.1type II toxin-antitoxin system Phd/YefM family antitoxinAntitoxin
ECTOBSL9_RS01065219698..222124-2427WP_063463505.1type I restriction endonuclease subunit R-
ECTOBSL9_RS01070222121..223125-1005WP_063463506.1virulence RhuM family protein-
ECTOBSL9_RS01075223122..224162-1041WP_082829662.1restriction endonuclease subunit S-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin YoeB

(7-86)

Antitoxin

Type II toxin-antitoxin system, antitoxin Phd/YefM

(1-69)


Sequences

Toxin        


Download         Length: 88 a.a.        Molecular weight: 10216.90 Da        Isoelectric Point: 10.2942

>T55385 WP_063463503.1 NZ_CP011994:c219126-218863 [Ectothiorhodospira sp. BSL-9]
VTWKLVYTKQAQRDARKLTASTLKPKAQELLALIAEDPYRKPPPFEKLVGDLAGAYSRRINIQHRLVYQVLEDERVVKVL
RLWSHYE

Download         Length: 264 bp

>T55385 NZ_CP011994:c219126-218863 [Ectothiorhodospira sp. BSL-9]
GTGACATGGAAGTTGGTTTACACCAAGCAAGCCCAAAGAGATGCAAGGAAGCTGACGGCCAGCACTCTCAAGCCGAAAGC
TCAGGAATTGTTGGCGCTCATTGCAGAAGATCCCTACCGTAAGCCGCCGCCGTTTGAGAAGCTCGTTGGTGATCTTGCAG
GGGCCTATTCGCGTCGCATCAATATTCAGCATCGTCTGGTCTATCAAGTGCTCGAGGACGAGCGAGTGGTGAAGGTGCTC
AGGCTCTGGAGCCACTACGAATAA

Antitoxin


Download         Length: 81 a.a.        Molecular weight: 9024.05 Da        Isoelectric Point: 4.0768

>AT55385 WP_063463504.1 NZ_CP011994:c219365-219123 [Ectothiorhodospira sp. BSL-9]
MAGITATEARSNLYRLIDETAESHQPIVITGKRNTAVLVSEEDWSAIQETLYLLSVPGMRESIREGMETSVDECHEELDW

Download         Length: 243 bp

>AT55385 NZ_CP011994:c219365-219123 [Ectothiorhodospira sp. BSL-9]
ATGGCCGGAATCACAGCAACTGAGGCGCGCAGCAACCTTTATCGGTTGATTGACGAAACGGCTGAATCCCACCAACCTAT
CGTGATCACGGGTAAGCGGAACACAGCGGTTCTGGTATCTGAGGAGGACTGGTCGGCAATTCAGGAAACACTCTATCTGC
TCTCGGTTCCAGGTATGCGAGAGTCTATTCGTGAGGGTATGGAAACCTCTGTGGATGAGTGCCATGAGGAGCTGGACTGG
TGA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
AlphaFold DBA0A166ZWB6

Antitoxin

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Source
ID
Structure
AlphaFold DBA0A166ZWC8

References