55270

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 398706..399067 Replicon chromosome
Accession NZ_CP011961
Organism Xanthomonas oryzae pv. oryzicola strain RS105

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag ACU12_RS01705 Protein ID WP_011257368.1
Coordinates 398933..399067 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag ACU12_RS01700 Protein ID WP_011407410.1
Coordinates 398706..398858 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ACU12_RS01680 395047..395730 - 684 WP_014505034.1 dTMP kinase -
ACU12_RS01685 396210..396748 - 539 Protein_326 GTPase -
ACU12_RS01690 396745..397353 - 609 WP_047340248.1 hypothetical protein -
ACU12_RS01695 397675..398598 + 924 WP_014505030.1 arginase -
ACU12_RS01700 398706..398858 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
ACU12_RS01705 398933..399067 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
ACU12_RS01710 399312..399521 + 210 WP_011407411.1 CsbD family protein -
ACU12_RS01715 399690..400979 + 1290 WP_048482945.1 tryptophan--tRNA ligase -
ACU12_RS01720 401032..402054 + 1023 WP_195765576.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T55270 WP_011257368.1 NZ_CP011961:398933-399067 [Xanthomonas oryzae pv. oryzicola]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T55270 NZ_CP011961:398933-399067 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT55270 WP_011407410.1 NZ_CP011961:398706-398858 [Xanthomonas oryzae pv. oryzicola]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT55270 NZ_CP011961:398706-398858 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References