55256

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 390202..390563 Replicon chromosome
Accession NZ_CP011957
Organism Xanthomonas oryzae pv. oryzicola strain BXOR1

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag ACU15_RS01690 Protein ID WP_011257368.1
Coordinates 390429..390563 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag ACU15_RS01685 Protein ID WP_011407410.1
Coordinates 390202..390354 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
ACU15_RS01660 386544..387227 - 684 WP_014505034.1 dTMP kinase -
ACU15_RS01665 387707..387999 - 293 Protein_325 hypothetical protein -
ACU15_RS01670 388009..388244 - 236 Protein_326 GTPase -
ACU15_RS01675 388241..388849 - 609 WP_047340248.1 hypothetical protein -
ACU15_RS01680 389171..390094 + 924 WP_014505030.1 arginase -
ACU15_RS01685 390202..390354 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
ACU15_RS01690 390429..390563 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
ACU15_RS01695 390806..391016 + 211 Protein_331 CsbD family protein -
ACU15_RS01700 391185..392474 + 1290 WP_024711517.1 tryptophan--tRNA ligase -
ACU15_RS01705 392527..393549 + 1023 WP_076342527.1 MBL fold metallo-hydrolase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T55256 WP_011257368.1 NZ_CP011957:390429-390563 [Xanthomonas oryzae pv. oryzicola]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T55256 NZ_CP011957:390429-390563 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT55256 WP_011407410.1 NZ_CP011957:390202-390354 [Xanthomonas oryzae pv. oryzicola]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT55256 NZ_CP011957:390202-390354 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References