Detailed information of TA system
Overview
TA module
| Type | IV | Classification (family/domain) | yeeUV (cbtA-cbeA)/CbtA-CbeA |
| Location | 4526229..4526948 | Replicon | chromosome |
| Accession | NZ_CP011584 | ||
| Organism | Enterobacter hormaechei strain CAV1668 | ||
Toxin (Protein)
| Gene name | yeeV | Uniprot ID | A0A144XIR2 |
| Locus tag | ABY64_RS22270 | Protein ID | WP_023305176.1 |
| Coordinates | 4526229..4526549 (-) | Length | 107 a.a. |
Antitoxin (Protein)
| Gene name | yeeU | Uniprot ID | - |
| Locus tag | ABY64_RS22275 | Protein ID | WP_032620726.1 |
| Coordinates | 4526583..4526948 (-) | Length | 122 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| ABY64_RS22235 | 4521503..4521946 | + | 444 | WP_017383639.1 | GNAT family N-acetyltransferase | - |
| ABY64_RS22240 | 4521979..4522500 | - | 522 | WP_017383638.1 | hypothetical protein | - |
| ABY64_RS24915 | 4522563..4522928 | - | 366 | WP_023302859.1 | DUF2778 domain-containing protein | - |
| ABY64_RS22245 | 4522938..4523423 | - | 486 | WP_017383637.1 | type VI secretion system tube protein Hcp | - |
| ABY64_RS22250 | 4523687..4524715 | - | 1029 | WP_071842900.1 | virulence RhuM family protein | - |
| ABY64_RS22255 | 4524774..4525115 | - | 342 | WP_032620730.1 | SymE family type I addiction module toxin | - |
| ABY64_RS22260 | 4525252..4525443 | + | 192 | WP_032620729.1 | toxin-antitoxin system HicB family antitoxin | - |
| ABY64_RS22265 | 4525445..4526026 | - | 582 | WP_017383635.1 | hypothetical protein | - |
| ABY64_RS22270 | 4526229..4526549 | - | 321 | WP_023305176.1 | TA system toxin CbtA family protein | Toxin |
| ABY64_RS22275 | 4526583..4526948 | - | 366 | WP_032620726.1 | type IV toxin-antitoxin system YeeU family antitoxin | Antitoxin |
| ABY64_RS22280 | 4526980..4527201 | - | 222 | WP_032620724.1 | DUF987 domain-containing protein | - |
| ABY64_RS22285 | 4527210..4527680 | - | 471 | WP_032620722.1 | DNA repair protein RadC | - |
| ABY64_RS22290 | 4527750..4528571 | - | 822 | WP_032620720.1 | DUF945 domain-containing protein | - |
| ABY64_RS24920 | 4529014..4529205 | - | 192 | WP_023305181.1 | hypothetical protein | - |
| ABY64_RS24050 | 4529264..4530103 | - | 840 | WP_050595703.1 | hypothetical protein | - |
| ABY64_RS22300 | 4530216..4530650 | - | 435 | WP_044488933.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Genomic island | - | - | 4521979..4552191 | 30212 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 107 a.a. Molecular weight: 12190.77 Da Isoelectric Point: 5.9559
>T54632 WP_023305176.1 NZ_CP011584:c4526549-4526229 [Enterobacter hormaechei]
MHISTVPATVTVSSRLSPVQVWQKLLTYILEHHYGLTINDTPFSNDTTIQEHIEAGVNLTDAVNFLVERFELVRIDQKGF
SWQDQEPWITSLDVHRAQFNLGLKRS
MHISTVPATVTVSSRLSPVQVWQKLLTYILEHHYGLTINDTPFSNDTTIQEHIEAGVNLTDAVNFLVERFELVRIDQKGF
SWQDQEPWITSLDVHRAQFNLGLKRS
Download Length: 321 bp
>T54632 NZ_CP011584:c4526549-4526229 [Enterobacter hormaechei]
ATGCATATTTCAACTGTACCGGCAACGGTGACGGTTTCGTCACGCCTGTCTCCTGTCCAAGTTTGGCAAAAACTATTAAC
GTATATTTTAGAGCATCATTACGGCCTCACGATCAACGACACACCGTTCAGTAACGATACGACGATTCAGGAACATATAG
AGGCTGGAGTGAATCTTACTGATGCTGTTAATTTCCTTGTGGAACGATTCGAGCTTGTGCGCATTGACCAGAAGGGTTTC
TCCTGGCAGGATCAAGAACCTTGGATAACATCTTTGGATGTTCATCGGGCACAGTTCAACCTTGGCTTGAAACGCTCATA
A
ATGCATATTTCAACTGTACCGGCAACGGTGACGGTTTCGTCACGCCTGTCTCCTGTCCAAGTTTGGCAAAAACTATTAAC
GTATATTTTAGAGCATCATTACGGCCTCACGATCAACGACACACCGTTCAGTAACGATACGACGATTCAGGAACATATAG
AGGCTGGAGTGAATCTTACTGATGCTGTTAATTTCCTTGTGGAACGATTCGAGCTTGTGCGCATTGACCAGAAGGGTTTC
TCCTGGCAGGATCAAGAACCTTGGATAACATCTTTGGATGTTCATCGGGCACAGTTCAACCTTGGCTTGAAACGCTCATA
A
Antitoxin
Download Length: 122 a.a. Molecular weight: 13574.29 Da Isoelectric Point: 6.4673
>AT54632 WP_032620726.1 NZ_CP011584:c4526948-4526583 [Enterobacter hormaechei]
MQSTTISGTSAENTSCLQWELKRNITPCFGARLVQESNRLYFLADRAGFNGSFSDDEALRLDQAFPLMMKQLERMLTAGE
LDPRSQHCVTRHHNGLTCEADTLGSHGYVYIAIYPQSALTR
MQSTTISGTSAENTSCLQWELKRNITPCFGARLVQESNRLYFLADRAGFNGSFSDDEALRLDQAFPLMMKQLERMLTAGE
LDPRSQHCVTRHHNGLTCEADTLGSHGYVYIAIYPQSALTR
Download Length: 366 bp
>AT54632 NZ_CP011584:c4526948-4526583 [Enterobacter hormaechei]
ATGCAGTCGACCACCATATCCGGCACATCGGCGGAGAACACATCCTGCCTTCAGTGGGAATTAAAACGTAATATCACGCC
GTGCTTCGGCGCTCGCCTGGTACAGGAAAGCAACCGCCTATACTTTCTGGCTGACCGGGCAGGATTTAATGGCTCATTCA
GTGACGATGAAGCTTTGCGTCTGGACCAGGCATTTCCACTGATGATGAAACAGCTTGAGCGGATGCTGACGGCTGGCGAG
CTTGATCCTCGCAGCCAGCACTGCGTCACACGGCATCACAACGGACTTACTTGTGAAGCTGACACTCTCGGCTCTCATGG
CTACGTTTACATTGCCATATATCCCCAGTCAGCTCTAACCAGATAA
ATGCAGTCGACCACCATATCCGGCACATCGGCGGAGAACACATCCTGCCTTCAGTGGGAATTAAAACGTAATATCACGCC
GTGCTTCGGCGCTCGCCTGGTACAGGAAAGCAACCGCCTATACTTTCTGGCTGACCGGGCAGGATTTAATGGCTCATTCA
GTGACGATGAAGCTTTGCGTCTGGACCAGGCATTTCCACTGATGATGAAACAGCTTGAGCGGATGCTGACGGCTGGCGAG
CTTGATCCTCGCAGCCAGCACTGCGTCACACGGCATCACAACGGACTTACTTGTGAAGCTGACACTCTCGGCTCTCATGG
CTACGTTTACATTGCCATATATCCCCAGTCAGCTCTAACCAGATAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|