Detailed information of TA system
Overview
TA module
| Type | VIII | Classification (family/domain) | SdsR-RyeA/- |
| Location | 793760..793898 | Replicon | chromosome |
| Accession | NZ_CP011539 | ||
| Organism | Klebsiella aerogenes strain G7 | ||
Toxin (RNA)
| Gene name | SdsR | ||
| Locus tag | - | ||
| Coordinates | 793795..793898 (+) |
Antitoxin (RNA)
| Gene name | RyeA | ||
| Locus tag | - | ||
| Coordinates | 793760..793898 (-) |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| EAG7_RS03630 | 788869..790929 | + | 2061 | WP_041165554.1 | oligopeptidase B | - |
| EAG7_RS03635 | 790932..791591 | - | 660 | WP_015366006.1 | exodeoxyribonuclease X | - |
| EAG7_RS03640 | 791671..791901 | - | 231 | WP_015366007.1 | DNA polymerase III subunit theta | - |
| EAG7_RS03645 | 792036..792410 | + | 375 | WP_015366008.1 | CopC domain-containing protein YobA | - |
| EAG7_RS03650 | 792414..793283 | + | 870 | WP_015366009.1 | copper homeostasis membrane protein CopD | - |
| EAG7_RS03655 | 793297..793638 | + | 342 | WP_015366010.1 | YebY family protein | - |
| - | 793760..793898 | - | 139 | - | - | Antitoxin |
| - | 793795..793898 | + | 104 | - | - | Toxin |
| EAG7_RS03660 | 794030..795109 | - | 1080 | WP_032708609.1 | phage integrase Arm DNA-binding domain-containing protein | - |
| EAG7_RS27045 | 795084..795356 | - | 273 | WP_071609883.1 | excisionase | - |
| EAG7_RS03665 | 795423..795815 | - | 393 | WP_125961766.1 | hypothetical protein | - |
| EAG7_RS03670 | 795845..796348 | - | 504 | WP_032716233.1 | siphovirus Gp157 family protein | - |
| EAG7_RS03675 | 796345..798681 | - | 2337 | WP_032716232.1 | hypothetical protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 772967..859650 | 86683 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 104 bp
>T54501 NZ_CP011539:793795-793898 [Klebsiella aerogenes]
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
GGCAAGGCGACTTAGCCTGCATTAATGCCAACTTTTAGCGCACGGCTCTCTCCCAAGAGCCATTTCCCTGGACCGAATAC
AGGAATCGTATTCGGTCTCTTTTT
Antitoxin
Download Length: 139 bp
>AT54501 NZ_CP011539:c793898-793760 [Klebsiella aerogenes]
AAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTTGGCAT
TAATGCAGGCTAAGTCGCCTTGCCTTATAAGAATAGTTGACTGTGACAGGTTTTCCAGT
AAAAAGAGACCGAATACGATTCCTGTATTCGGTCCAGGGAAATGGCTCTTGGGAGAGAGCCGTGCGCTAAAAGTTGGCAT
TAATGCAGGCTAAGTCGCCTTGCCTTATAAGAATAGTTGACTGTGACAGGTTTTCCAGT
