Detailed information of TA system TA053816

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): rlegTA/AbiEii-AbiEi
• Location: 1076561..1078040
• Replicon: chromosome
• Accession: NZ_CP011310
• Organism: Aurantiacibacter atlanticus strain s21-N3

Toxin (Protein)

• Gene name: rlegT
• Uniprot ID: -
• Locus tag: CP97_RS05205
• Protein ID: WP_048885072.1
• Coordinates: 1076561..1077427 (-)
• Length: 289 a.a.

Antitoxin (Protein)

• Gene name: rlegA
• Uniprot ID: -
• Locus tag: CP97_RS05210
• Protein ID: WP_048885073.1
• Coordinates: 1077420..1078040 (-)
• Length: 207 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
CP97_RS05190	1073019..1074254	+	1236	WP_082863725.1	hypothetical protein	-
CP97_RS05195	1074355..1074939	+	585	WP_048885070.1	hypothetical protein	-
CP97_RS05200	1074936..1076222	+	1287	WP_048885071.1	hypothetical protein	-
CP97_RS05205	1076561..1077427	-	867	WP_048885072.1	nucleotidyl transferase AbiEii/AbiGii toxin family protein	Toxin
CP97_RS05210	1077420..1078040	-	621	WP_048885073.1	AbiEi antitoxin N-terminal domain-containing protein	Antitoxin
CP97_RS05215	1078168..1078803	-	636	WP_048885074.1	LexA family transcriptional regulator	-
CP97_RS05220	1078914..1079246	+	333	WP_048885075.1	hypothetical protein	-
CP97_RS05225	1079243..1079452	+	210	WP_048885076.1	hypothetical protein	-
CP97_RS05230	1079454..1082159	-	2706	WP_048885077.1	conjugal transfer protein TraG N-terminal domain-containing protein	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)
	-	inside	Integrative and Conjugative Element	-	-	972801..1146027	173226

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• Nucleotidyl transferase AbiEii toxin, Type IV TA system (38-264)

Antitoxin

• Transcriptional regulator, AbiEi antitoxin (12-56)

Sequences

Toxin

Protein

• Length: 289 a.a.
• Molecular weight: 32271.88 Da
• Isoelectric Point: 4.5206

>T53816 WP_048885072.1 NZ_CP011310:c1077427-1076561 [Aurantiacibacter atlanticus]
MARQPVNLAKSVKDRLLNLARAEGKVFDVVLVRFALERLLYRLSLSEHRNRFVLKGGMLVTIWLDDDNRVTRDADFLGHG
DADADRLVADFKEIMSVDVDDGLVFDIDNLSATAIREEMEYGGTRLKTVAYLEKTRIPITIDIGFGDAMADPTRQLDYPT
LLDLPAPNIRTYPPATVIAEKFQAIVVLGIANGRMKDFYDLWAIPRSINVPDEELDAALAATFERRETAIPTERPAGLTP
EMADDPNKQRQWKAYAASIELENVELQEVVDAIWALIGPACERLTRAS

Nucleotide

• Length: 867 bp

>T53816 NZ_CP011310:c1077427-1076561 [Aurantiacibacter atlanticus]
ATGGCTAGGCAGCCGGTCAACCTCGCCAAGTCGGTCAAAGACCGCCTGCTCAATCTGGCACGGGCGGAAGGAAAGGTGTT
CGATGTGGTGCTCGTGCGTTTCGCGCTCGAGCGGCTTCTCTATCGCCTGTCACTCTCCGAGCATCGGAATCGCTTCGTCC
TCAAGGGCGGGATGCTCGTGACCATCTGGCTCGACGACGATAACCGGGTCACGCGCGATGCGGATTTCCTCGGCCACGGC
GATGCGGATGCCGACCGGCTTGTGGCCGATTTCAAGGAAATCATGAGCGTTGATGTAGACGACGGACTGGTCTTCGATAT
CGACAACCTCTCGGCGACGGCAATCCGCGAGGAGATGGAGTATGGCGGCACTCGCCTGAAGACCGTCGCCTATCTCGAGA
AGACGCGCATCCCGATCACCATCGACATTGGTTTCGGCGACGCGATGGCCGACCCGACACGTCAGCTGGACTATCCAACG
CTGCTCGATCTGCCCGCGCCGAACATCCGGACCTATCCTCCCGCAACAGTGATAGCCGAGAAGTTCCAGGCAATCGTGGT
GCTCGGAATTGCCAACGGACGCATGAAGGACTTCTACGATCTGTGGGCGATCCCAAGGTCAATCAATGTCCCCGACGAAG
AACTCGATGCCGCCTTGGCCGCGACTTTCGAGCGGCGGGAAACAGCCATCCCTACTGAACGACCTGCCGGCCTTACGCCG
GAGATGGCGGACGATCCGAACAAGCAGCGACAGTGGAAAGCCTACGCAGCCTCAATCGAGCTCGAGAATGTCGAACTGCA
GGAAGTCGTTGATGCCATATGGGCCCTGATCGGTCCTGCATGCGAGCGCCTCACTCGGGCTTCATGA

Antitoxin

Protein

• Length: 207 a.a.
• Molecular weight: 22828.11 Da
• Isoelectric Point: 9.6032

>AT53816 WP_048885073.1 NZ_CP011310:c1078040-1077420 [Aurantiacibacter atlanticus]
MPQEQGTQRDTLRELFGAQPILRARELRKAGVAPQTIARALEDGEIERISRGLYQYADAETDADQALAEIAKKIPKGVIA
MLSALAFHGLTDQMPRRIWVAIGNQDWSPTLTYPPIRTVRFSDKYLQQGIEHHQIAGVSVPIYSVPKTLADVFRNSRLVD
RSVAIEGLRAAIEQRKARPGEIAQAAVEGGAWKKMQPYLEALTSNG

Nucleotide

• Length: 621 bp

>AT53816 NZ_CP011310:c1078040-1077420 [Aurantiacibacter atlanticus]
ATGCCACAAGAGCAAGGAACACAGCGCGACACCCTGCGCGAACTGTTCGGCGCGCAGCCAATCCTGCGCGCGCGCGAACT
GCGCAAGGCAGGCGTCGCTCCTCAAACCATAGCCCGGGCCCTCGAAGACGGCGAAATCGAGCGAATATCGCGCGGCCTCT
ATCAATACGCCGATGCCGAGACCGACGCTGACCAAGCTCTGGCGGAAATAGCAAAGAAGATCCCCAAAGGCGTGATTGCA
ATGCTCTCGGCGCTCGCCTTTCACGGCCTTACCGACCAGATGCCGCGCCGCATCTGGGTCGCGATCGGAAACCAGGACTG
GTCGCCTACCCTGACCTATCCCCCAATCCGCACCGTTCGCTTCAGCGACAAATACCTCCAGCAGGGAATCGAGCACCACC
AGATCGCCGGGGTATCCGTACCCATCTATTCCGTGCCCAAGACGCTGGCGGATGTCTTCAGGAACTCGAGACTCGTTGAC
CGCTCGGTCGCAATTGAAGGCCTTCGTGCCGCGATCGAACAGAGAAAAGCTCGGCCCGGCGAAATAGCCCAGGCTGCCGT
CGAAGGCGGCGCCTGGAAGAAGATGCAACCCTATCTCGAGGCCCTCACCTCCAATGGCTAG