Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/RHH-MazF
Location 182888..183406 Replicon plasmid pRLLBG43
Accession NZ_CP011297
Organism Rhodococcus erythropolis strain BG43

Toxin (Protein)


Gene name mazF Uniprot ID -
Locus tag XU06_RS31365 Protein ID WP_046380381.1
Coordinates 183104..183406 (+) Length 101 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID -
Locus tag XU06_RS31360 Protein ID WP_046380454.1
Coordinates 182888..183103 (+) Length 72 a.a.

Genomic Context

XU06_RS31335XU06_RS31340XU06_RS31345XU06_RS31350XU06_RS33300XU06_RS31360XU06_RS31365XU06_RS31370XU06_RS31375XU06_RS31380
Location: 178385..179623 (1239 bp)
Type: Others
Protein ID: WP_046380376.1
Location: 179620..179814 (195 bp)
Type: Others
Protein ID: WP_155404359.1
Location: 179811..180998 (1188 bp)
Type: Others
Protein ID: WP_046380378.1
Location: 181069..182367 (1299 bp)
Type: Others
Protein ID: WP_046380379.1
Location: 182397..182745 (349 bp)
Type: Others
Protein ID: Protein_194
Location: 182888..183103 (216 bp)
Type: Antitoxin
Protein ID: WP_046380454.1
Location: 183104..183406 (303 bp)
Type: Toxin
Protein ID: WP_046380381.1
Location: 183435..185387 (1953 bp)
Type: Others
Protein ID: WP_046380382.1
Location: 185387..186184 (798 bp)
Type: Others
Protein ID: WP_046380383.1
Location: 186315..187364 (1050 bp)
Type: Others
Protein ID: WP_052741076.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
XU06_RS31335178385..179623+1239WP_046380376.1hypothetical protein-
XU06_RS31340179620..179814+195WP_155404359.1hypothetical protein-
XU06_RS31345179811..180998+1188WP_046380378.1hypothetical protein-
XU06_RS31350181069..182367+1299WP_046380379.1AAA family ATPase-
XU06_RS33300182397..182745+349Protein_194hypothetical protein-
XU06_RS31360182888..183103+216WP_046380454.1hypothetical proteinAntitoxin
XU06_RS31365183104..183406+303WP_046380381.1type II toxin-antitoxin system PemK/MazF family toxinToxin
XU06_RS31370183435..185387+1953WP_046380382.1hypothetical protein-
XU06_RS31375185387..186184+798WP_046380383.1hypothetical protein-
XU06_RS31380186315..187364-1050WP_052741076.1DUF1016 family protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
-insideNon-Mobilizable plasmid--1..261537261537


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 101 a.a.        Molecular weight: 12963.60 Da        Isoelectric Point: 12.8000

>T53786 WP_046380381.1 NZ_CP011297:183104-183406 [Rhodococcus erythropolis]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKKKKKK

Download         Length: 303 bp

>T53786 NZ_CP011297:183104-183406 [Rhodococcus erythropolis]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Antitoxin


Download         Length: 72 a.a.        Molecular weight: 9246.55 Da        Isoelectric Point: 12.6512

>AT53786 WP_046380454.1 NZ_CP011297:182888-183103 [Rhodococcus erythropolis]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK

Download         Length: 216 bp

>AT53786 NZ_CP011297:182888-183103 [Rhodococcus erythropolis]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References