53785

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 197769..198325 Replicon plasmid pRLCBG43
Accession NZ_CP011296
Organism Rhodococcus erythropolis strain BG43

Toxin (Protein)


Gene name mazF Uniprot ID -
Locus tag XU06_RS30225 Protein ID WP_046380251.1
Coordinates 198026..198325 (+) Length 100 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID -
Locus tag XU06_RS30220 Protein ID WP_208605006.1
Coordinates 197769..198026 (+) Length 86 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
XU06_RS30190 193412..193600 + 189 WP_155404342.1 hypothetical protein -
XU06_RS30195 193597..194385 + 789 WP_046380245.1 ParA family protein -
XU06_RS30200 194378..194749 + 372 WP_046380246.1 hypothetical protein -
XU06_RS32815 194961..196784 - 1824 WP_155404343.1 hypothetical protein -
XU06_RS30210 197003..197224 - 222 WP_046380248.1 hypothetical protein -
XU06_RS30220 197769..198026 + 258 WP_208605006.1 antitoxin Antitoxin
XU06_RS30225 198026..198325 + 300 WP_046380251.1 type II toxin-antitoxin system PemK/MazF family toxin Toxin
XU06_RS30230 198354..200207 + 1854 WP_046380252.1 hypothetical protein -
XU06_RS30235 200207..201004 + 798 WP_046380253.1 hypothetical protein -
XU06_RS30240 201281..201445 + 165 WP_155404344.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Non-Mobilizable plasmid - - 1..240129 240129


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin


No domain identified.


Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 100 a.a.        Molecular weight: 12835.43 Da        Isoelectric Point: 12.7956

>T53785 WP_046380251.1 NZ_CP011296:198026-198325 [Rhodococcus erythropolis]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKKKKKKKKKKKKKKKK

Download         Length: 300 bp

>T53785 NZ_CP011296:198026-198325 [Rhodococcus erythropolis]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA

Antitoxin


Download         Length: 86 a.a.        Molecular weight: 11040.99 Da        Isoelectric Point: 12.7294

>AT53785 WP_208605006.1 NZ_CP011296:197769-198026 [Rhodococcus erythropolis]
KKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKKK
KKKKKK

Download         Length: 258 bp

>AT53785 NZ_CP011296:197769-198026 [Rhodococcus erythropolis]
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAA
AAAAAAAAAAAAAAAAAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References