Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 511011..511647 Replicon chromosome
Accession NZ_CP011101
Organism Bacillus sp. LM 4-2

Toxin (Protein)


Gene name mazF Uniprot ID G4NU33
Locus tag bslm_RS02550 Protein ID WP_003156187.1
Coordinates 511297..511647 (+) Length 117 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID G4NU32
Locus tag bslm_RS02545 Protein ID WP_003225183.1
Coordinates 511011..511292 (+) Length 94 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
bslm_RS02525 507370..507969 - 600 WP_032722928.1 rhomboid family intramembrane serine protease -
bslm_RS02530 508064..508429 + 366 WP_015252768.1 holo-ACP synthase -
bslm_RS02535 508595..509611 + 1017 WP_003234282.1 outer membrane lipoprotein carrier protein LolA -
bslm_RS02540 509726..510895 + 1170 WP_015252766.1 alanine racemase -
bslm_RS02545 511011..511292 + 282 WP_003225183.1 type II toxin-antitoxin system antitoxin EndoAI Antitoxin
bslm_RS02550 511297..511647 + 351 WP_003156187.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
bslm_RS02555 511762..512586 + 825 WP_080320324.1 RsbT co-antagonist protein RsbRA -
bslm_RS02560 512591..512956 + 366 WP_003225190.1 RsbT antagonist protein RsbS -
bslm_RS02565 512960..513361 + 402 WP_003246640.1 serine/threonine-protein kinase RsbT -
bslm_RS02570 513373..514380 + 1008 WP_003234295.1 phosphoserine phosphatase RsbU -
bslm_RS02575 514442..514771 + 330 WP_003234298.1 anti-sigma factor antagonist RsbV -
bslm_RS02580 514768..515250 + 483 WP_003234299.1 anti-sigma B factor RsbW -
bslm_RS02585 515216..516004 + 789 WP_003246715.1 RNA polymerase sigma factor SigB -
bslm_RS02590 516004..516603 + 600 WP_003246608.1 phosphoserine phosphatase RsbX -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(4-111)

Antitoxin

Ribbon-helix-helix protein, CopG

(12-45)


Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12977.98 Da        Isoelectric Point: 4.8781

>T53341 WP_003156187.1 NZ_CP011101:511297-511647 [Bacillus sp. LM 4-2]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTAIVAAITAQIQKAKLPTHVEIDAKRYGFERDSVILLEQI
RTIDKQRLTDKITHLDDEMMDKVDEALQISLALIDF

Download         Length: 351 bp

>T53341 NZ_CP011101:511297-511647 [Bacillus sp. LM 4-2]
TTGATTGTGAAACGCGGCGATGTTTATTTTGCTGATTTATCTCCTGTTGTTGGCTCAGAGCAAGGCGGGGTGCGCCCGGT
TTTAGTGATCCAAAATGACATCGGAAATCGCTTCAGCCCAACTGCTATTGTTGCAGCCATAACAGCACAAATACAGAAAG
CGAAATTACCAACCCACGTCGAAATCGATGCAAAACGCTACGGTTTTGAAAGAGATTCCGTTATTTTGCTGGAGCAAATT
CGGACGATTGACAAGCAAAGGTTAACGGATAAGATTACTCATCTGGATGATGAAATGATGGATAAGGTTGATGAAGCCTT
ACAAATCAGTTTGGCACTCATTGATTTTTAG

Antitoxin


Download         Length: 94 a.a.        Molecular weight: 10546.92 Da        Isoelectric Point: 6.4708

>AT53341 WP_003225183.1 NZ_CP011101:511011-511292 [Bacillus sp. LM 4-2]
MSESSARTEMKISLPENLVAELDGVAMREKRSRNELISQAVRAYVSERTTRHNRDLMRRGYMEMAKINLNISSEAHFAEC
EAETTVERLVSGG

Download         Length: 282 bp

>AT53341 NZ_CP011101:511011-511292 [Bacillus sp. LM 4-2]
TTGTCTGAATCCAGCGCAAGAACCGAAATGAAAATCAGCTTGCCCGAAAACCTAGTAGCTGAATTGGATGGTGTAGCGAT
GCGGGAGAAACGAAGCAGAAACGAACTGATATCACAAGCAGTGAGAGCGTATGTCAGCGAACGAACAACTCGTCACAACC
GTGATTTGATGAGACGCGGCTATATGGAAATGGCGAAAATCAACCTGAATATTTCTTCTGAGGCTCACTTTGCGGAGTGC
GAGGCTGAAACGACAGTTGAGCGCTTAGTCAGCGGAGGATAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 4MDX
PDB 4ME7
PDB 1NE8

Antitoxin

Source ID Structure
PDB 4ME7
AlphaFold DB G4NU32

References