Detailed information of TA system TA051860

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): mazEF/MazF(toxin)
• Location: 2188027..2188556
• Replicon: chromosome
• Accession: NZ_CP010296
• Organism: Staphylococcus aureus strain ATCC BAA1680

Toxin (Protein)

• Gene name: mazF
• Uniprot ID: -
• Locus tag: RM30_RS10300
• Protein ID: WP_000621175.1
• Coordinates: 2188027..2188389 (-)
• Length: 121 a.a.

Antitoxin (Protein)

• Gene name: mazE
• Uniprot ID: T1YCG8
• Locus tag: RM30_RS10305
• Protein ID: WP_000948331.1
• Coordinates: 2188386..2188556 (-)
• Length: 57 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description
RM30_RS10280	2185005..2185775	-	771	WP_001041103.1	RNA polymerase sigma factor SigB	-
RM30_RS10285	2185750..2186229	-	480	WP_001190829.1	anti-sigma B factor RsbW	-
RM30_RS10290	2186231..2186557	-	327	WP_001052491.1	anti-sigma factor antagonist	-
RM30_RS10295	2186676..2187677	-	1002	WP_000390829.1	PP2C family protein-serine/threonine phosphatase	-
RM30_RS10300	2188027..2188389	-	363	WP_000621175.1	type II toxin-antitoxin system PemK/MazF family toxin	Toxin
RM30_RS10305	2188386..2188556	-	171	WP_000948331.1	type II toxin-antitoxin system antitoxin MazE	Antitoxin
RM30_RS10310	2188641..2189789	-	1149	WP_001281145.1	alanine racemase	-
RM30_RS10315	2189855..2190214	-	360	WP_000581200.1	holo-ACP synthase	-
RM30_RS10320	2190218..2190709	-	492	WP_001205910.1	PH domain-containing protein	-
RM30_RS10325	2190696..2192279	-	1584	WP_001294626.1	PH domain-containing protein	-
RM30_RS10330	2192272..2192751	-	480	WP_001287088.1	hypothetical protein	-
RM30_RS10335	2192959..2193519	-	561	WP_001092411.1	K(+)-transporting ATPase subunit C	-

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• mRNA interferase PemK-like (3-110)

Antitoxin

No domain identified.

Sequences

Toxin

Protein

• Length: 121 a.a.
• Molecular weight: 13441.69 Da
• Isoelectric Point: 10.1654

>T51860 WP_000621175.1 NZ_CP010296:c2188389-2188027 [Staphylococcus aureus]
MIRRGDVYLADLSPVQGSEQGGVRPVVIIQNDTGNKYSPTVIVAAITGRINKAKIPTHVEIEKKKYKLDKDSVILLEQIR
TLDKKRLKEKLTYLSDDKMKEVDNALMISLGLNAVAHQKN

Nucleotide

• Length: 363 bp

>T51860 NZ_CP010296:c2188389-2188027 [Staphylococcus aureus]
ATGATTAGACGAGGAGATGTTTATTTAGCAGATTTATCACCAGTACAGGGATCTGAACAAGGGGGAGTCAGACCTGTAGT
CATAATTCAAAATGATACTGGTAATAAATATAGTCCTACAGTTATTGTTGCGGCAATAACTGGTAGGATTAATAAAGCGA
AAATACCGACACATGTAGAGATTGAAAAGAAAAAGTATAAGTTGGATAAAGACTCAGTTATATTATTAGAACAAATTCGT
ACACTTGATAAAAAACGATTGAAAGAAAAACTGACGTACTTATCCGATGATAAAATGAAAGAAGTAGATAATGCACTAAT
GATTAGTTTAGGGCTGAATGCAGTAGCTCACCAGAAAAATTAG

Antitoxin

Protein

• Length: 57 a.a.
• Molecular weight: 6251.78 Da
• Isoelectric Point: 3.8305

>AT51860 WP_000948331.1 NZ_CP010296:c2188556-2188386 [Staphylococcus aureus]
MLSFSQNRSHSLEQSLKEGYSQMADLNLSLANEAFPIECEACDCNETYLSSNSTNE

Nucleotide

• Length: 171 bp

>AT51860 NZ_CP010296:c2188556-2188386 [Staphylococcus aureus]
ATGTTATCTTTTAGTCAAAATAGAAGTCATAGCTTAGAACAATCTTTAAAAGAAGGATATTCACAAATGGCTGATTTAAA
TCTCTCCCTAGCGAACGAAGCTTTTCCGATAGAGTGTGAAGCATGCGATTGCAACGAAACATATTTATCTTCTAATTCAA
CGAATGAATGA

Structures

Antitoxin

• AlphaFold DB: A0A0E0VRZ1