Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mosAT/AbiEii-AbiEi
Location 575986..577684 Replicon chromosome
Accession NZ_CP009678
Organism Pectobacterium odoriferum strain BC S7

Toxin (Protein)


Gene name mosT Uniprot ID -
Locus tag BCS7_RS02595 Protein ID WP_103164621.1
Coordinates 575986..576915 (-) Length 310 a.a.

Antitoxin (Protein)


Gene name mosA Uniprot ID -
Locus tag BCS7_RS02600 Protein ID WP_039491413.1
Coordinates 576902..577684 (-) Length 261 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BCS7_RS02575 571877..573958 - 2082 WP_044203832.1 DUF4034 domain-containing protein -
BCS7_RS02580 573981..574262 + 282 WP_146043541.1 hypothetical protein -
BCS7_RS02585 574405..574668 - 264 WP_039543254.1 DUF2798 domain-containing protein -
BCS7_RS02590 574797..575699 + 903 WP_103164620.1 LysR family transcriptional regulator -
BCS7_RS02595 575986..576915 - 930 WP_103164621.1 nucleotidyl transferase AbiEii/AbiGii toxin family protein Toxin
BCS7_RS02600 576902..577684 - 783 WP_039491413.1 type IV toxin-antitoxin system AbiEi family antitoxin domain-containing protein Antitoxin
BCS7_RS22525 577887..578119 + 233 Protein_499 hypothetical protein -
BCS7_RS02605 578146..578607 + 462 WP_039491412.1 hypothetical protein -
BCS7_RS02610 578604..578813 + 210 WP_039491410.1 helix-turn-helix domain-containing protein -
BCS7_RS02620 579131..579976 + 846 WP_039491409.1 AraC family transcriptional regulator -
BCS7_RS02625 580012..580602 + 591 WP_103164622.1 LysE family translocator -
BCS7_RS02630 580599..581174 - 576 WP_039491406.1 transcriptional regulator -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Nucleotidyl transferase AbiEii toxin, Type IV TA system

(13-261)

Antitoxin

Transcriptional regulator, AbiEi 3 antitoxin, Type IV TA system

(95-247)


Sequences

Toxin        


Download         Length: 310 a.a.        Molecular weight: 35260.66 Da        Isoelectric Point: 5.9099

>T49393 WP_103164621.1 NZ_CP009678:c576915-575986 [Pectobacterium odoriferum]
MDQRDIYARQVRLLMTALPHVAKESCFALKGGTAINLFMQDFPRLSVDIDLVYQTFIDRDTDLIAIDDALMRITESLNGR
LGITAIQQENKADEKRIIVNTVDAQIKIEVSPVWRGLLLPPAEMPVCEQVEMEFGFTTMNVVSLADLYGGKICAALDRQH
PRDLFDVLNMLEKPGLTRELFDGFLCYLAGHPRPIAELLAPNWDIARFATLYQQEFSGMTQHETSLESLLSVTTLLPQAL
RSHFTTQDKQFLLSYKQNTPDWSLYRYPDIQHLPAIRWKQHNLSALYAKNPAKFSAAVSKLEKVLEQRF

Download         Length: 930 bp

>T49393 NZ_CP009678:c576915-575986 [Pectobacterium odoriferum]
ATGGATCAGCGTGATATTTATGCCCGACAGGTCAGGCTGTTAATGACCGCCCTGCCTCATGTAGCGAAAGAGTCCTGTTT
CGCGCTGAAAGGCGGCACAGCAATCAATCTGTTTATGCAGGATTTCCCTCGCCTATCGGTAGATATCGATCTGGTTTATC
AAACCTTCATAGATCGTGATACTGATCTAATCGCTATTGACGATGCATTGATGCGTATTACGGAATCGCTGAACGGCAGA
CTTGGGATCACAGCGATCCAGCAGGAGAATAAAGCCGATGAAAAACGCATCATCGTTAACACCGTTGATGCGCAGATAAA
GATTGAAGTCAGCCCTGTTTGGCGTGGATTGCTGTTACCTCCAGCAGAAATGCCAGTATGCGAGCAGGTGGAAATGGAAT
TCGGCTTTACTACCATGAATGTCGTTTCACTGGCGGATCTTTACGGCGGTAAAATCTGCGCTGCGCTCGATCGCCAGCAC
CCACGCGATCTGTTTGACGTGCTAAATATGCTGGAGAAACCGGGCCTCACACGTGAGCTCTTTGATGGCTTTCTTTGCTA
TCTGGCTGGTCATCCCCGCCCCATCGCCGAACTGCTGGCACCAAACTGGGACATTGCACGGTTCGCTACACTGTACCAAC
AGGAATTTTCGGGTATGACGCAGCATGAAACGTCTCTGGAATCACTTTTGTCAGTGACGACGTTACTGCCGCAAGCATTG
AGATCTCACTTTACCACTCAAGATAAACAGTTTTTACTTAGCTATAAGCAAAACACCCCTGACTGGTCGCTATATCGCTA
TCCTGATATTCAACATCTTCCCGCTATTCGCTGGAAACAGCATAATTTATCGGCCTTATATGCTAAAAATCCGGCCAAAT
TTAGTGCGGCGGTAAGCAAGCTTGAGAAGGTTCTGGAACAGCGATTTTAG

Antitoxin


Download         Length: 261 a.a.        Molecular weight: 29313.58 Da        Isoelectric Point: 8.3920

>AT49393 WP_039491413.1 NZ_CP009678:c577684-576902 [Pectobacterium odoriferum]
MTNYLNWLMQNTLPGQVLLQSWLTRNGIDRKLSYVYVQNGWLRRIAHGVYCRTGREPDWVDAVYCLQTQWEKPVRVAGLT
SLALQGYSHYTELGKPQIWLTLPAYITLPGWFAAFEPSATFIVLYTSGLSVDVMPFTTELRIGDRRLTGSVPELAAYEIA
SGVPTQISFEHADALFQGLHLLSPRKLQALLSASRSVKTNRVMLYLAQRNGHPYFQYLDKSGIEVGAGKRQIIPGGWLEP
DYQITVPREFKSEGIEDGSA

Download         Length: 783 bp

>AT49393 NZ_CP009678:c577684-576902 [Pectobacterium odoriferum]
TTGACTAATTATCTAAACTGGCTAATGCAAAACACGCTGCCCGGTCAGGTGTTGCTCCAATCATGGCTTACCCGCAACGG
TATAGATCGTAAGCTCTCTTACGTCTATGTCCAAAACGGTTGGCTCAGGCGGATCGCGCACGGCGTTTACTGCCGGACGG
GCCGAGAACCGGATTGGGTAGATGCGGTTTACTGCCTGCAAACACAATGGGAAAAACCTGTGCGGGTGGCAGGGCTGACC
AGCCTTGCGCTACAGGGCTATTCCCATTATACCGAACTGGGTAAACCTCAAATCTGGCTCACGCTCCCGGCGTACATTAC
GCTACCGGGATGGTTCGCCGCCTTTGAACCATCTGCCACCTTTATCGTGCTCTATACATCAGGCCTGTCGGTTGATGTGA
TGCCATTCACGACAGAACTGAGAATCGGCGATCGGCGATTGACTGGCAGCGTTCCAGAACTGGCCGCGTATGAAATCGCC
AGTGGCGTTCCCACACAAATATCATTTGAGCATGCCGATGCATTATTTCAGGGTCTACACCTTCTTAGCCCGCGTAAATT
ACAGGCGCTGCTTTCCGCCAGTCGTTCGGTAAAAACCAACCGGGTGATGCTCTACCTTGCCCAGCGCAACGGACATCCTT
ATTTTCAGTATCTCGATAAAAGTGGTATAGAAGTAGGCGCAGGAAAGCGGCAAATTATCCCCGGCGGCTGGCTGGAACCG
GATTACCAGATCACTGTTCCCAGAGAGTTTAAATCGGAAGGAATCGAAGATGGATCAGCGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure

Antitoxin

Source ID Structure

References