49317

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) pemIK/MazF(toxin)
Location 3929994..3930636 Replicon chromosome
Accession NZ_CP009605
Organism Bacillus cereus strain S2-8

Toxin (Protein)


Gene name pemK Uniprot ID J8CWW5
Locus tag BF33_RS20945 Protein ID WP_000635963.1
Coordinates 3929994..3930344 (-) Length 117 a.a.

Antitoxin (Protein)


Gene name pemI Uniprot ID R8I8H2
Locus tag BF33_RS20950 Protein ID WP_000004570.1
Coordinates 3930349..3930636 (-) Length 96 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BF33_RS20930 3926930..3927388 - 459 WP_000344248.1 SprT family protein -
BF33_RS20935 3927584..3927700 + 117 WP_001143642.1 cortex morphogenetic protein CmpA -
BF33_RS20940 3927758..3929926 - 2169 WP_000426225.1 RNA-binding transcriptional accessory protein -
BF33_RS20945 3929994..3930344 - 351 WP_000635963.1 type II toxin-antitoxin system endoribonuclease NdoA Toxin
BF33_RS20950 3930349..3930636 - 288 WP_000004570.1 antitoxin EndoAI Antitoxin
BF33_RS20955 3930946..3932115 - 1170 WP_000390600.1 alanine racemase -
BF33_RS20960 3932234..3933184 - 951 WP_025388382.1 outer membrane lipoprotein carrier protein LolA -
BF33_RS20965 3933341..3933700 - 360 WP_000635040.1 holo-ACP synthase -
BF33_RS20970 3933793..3934365 + 573 WP_000906926.1 rhomboid family intramembrane serine protease -
BF33_RS20975 3934358..3935320 - 963 WP_000961155.1 UV DNA damage repair endonuclease UvsE -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(1-113)

Antitoxin


No domain identified.



Sequences

Toxin        


Download         Length: 117 a.a.        Molecular weight: 12974.12 Da        Isoelectric Point: 5.7168

>T49317 WP_000635963.1 NZ_CP009605:c3930344-3929994 [Bacillus cereus]
MIVKRGDVYFADLSPVVGSEQGGVRPVLVIQNDIGNRFSPTVIVAAITAQIQKAKLPTHVEIDAKKYGFERDSVILLEQI
RTIDKQRLTDKITHLDEVMMIRVDEALQISLGLIDF

Download         Length: 351 bp

>T49317 NZ_CP009605:c3930344-3929994 [Bacillus cereus]
TTGATTGTAAAACGCGGCGACGTGTATTTTGCAGACCTTTCCCCAGTTGTTGGTTCTGAGCAAGGAGGCGTTCGTCCGGT
TCTTGTCATTCAAAATGACATCGGAAATCGTTTTAGTCCAACGGTGATTGTAGCGGCTATTACTGCACAGATTCAAAAAG
CGAAATTACCCACTCATGTGGAAATTGATGCGAAAAAGTACGGTTTTGAGAGAGATTCTGTTATTTTACTTGAGCAGATT
CGAACAATCGATAAGCAGCGCTTAACGGACAAAATCACTCACTTAGATGAAGTGATGATGATTCGTGTAGATGAAGCGCT
ACAAATTAGTTTAGGACTAATAGATTTTTAA

Antitoxin


Download         Length: 96 a.a.        Molecular weight: 10780.36 Da        Isoelectric Point: 8.9605

>AT49317 WP_000004570.1 NZ_CP009605:c3930636-3930349 [Bacillus cereus]
VSESSVTTEIVVRLPKQMVTELDGIGKQENKNRHELICQATQLLLRQHKTKKRYQHESMRRGYIEMGKINLGIASEAFLA
EYEAAHTVERLVSGG

Download         Length: 288 bp

>AT49317 NZ_CP009605:c3930636-3930349 [Bacillus cereus]
GTGTCCGAATCAAGTGTAACTACTGAAATCGTGGTTCGGTTGCCAAAGCAAATGGTAACGGAATTGGACGGAATTGGAAA
ACAAGAGAATAAGAATCGCCATGAACTAATTTGCCAGGCAACACAACTGTTATTGCGTCAACATAAGACGAAGAAACGCT
ACCAACATGAATCAATGCGACGTGGGTACATTGAAATGGGAAAAATTAATCTTGGTATTGCATCTGAAGCTTTCTTAGCA
GAGTATGAAGCAGCTCATACAGTAGAACGCTTAGTTAGCGGGGGGTAA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 4HKE
PDB 7BXY

Antitoxin

Source ID Structure
AlphaFold DB A0A366FY90

References