Detailed information of TA system
Bioinformatically predictedOverview
TA module
Type | II | Classification (family/domain) | mazEF/MazF(toxin) |
Location | 3056393..3056963 | Replicon | chromosome |
Accession | NZ_CP009243 | ||
Organism | Mycobacterium tuberculosis variant bovis BCG strain Russia 368 |
Toxin (Protein)
Gene name | mazF | Uniprot ID | P71650 |
Locus tag | BCGR_RS14465 | Protein ID | WP_003414166.1 |
Coordinates | 3056393..3056749 (-) | Length | 119 a.a. |
Antitoxin (Protein)
Gene name | mazE | Uniprot ID | P0CL61 |
Locus tag | BCGR_RS14470 | Protein ID | WP_003901465.1 |
Coordinates | 3056733..3056963 (-) | Length | 77 a.a. |
Genomic Context
Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
---|---|---|---|---|---|---|
BCGR_RS14445 | 3051845..3053533 | - | 1689 | WP_003414155.1 | alpha/beta hydrolase family protein | - |
BCGR_RS14450 | 3053537..3053863 | - | 327 | WP_003414157.1 | hypothetical protein | - |
BCGR_RS14455 | 3054036..3054623 | + | 588 | WP_003914429.1 | DUF3558 family protein | - |
BCGR_RS14460 | 3054642..3056291 | + | 1650 | WP_003899485.1 | CocE/NonD family hydrolase | - |
BCGR_RS14465 | 3056393..3056749 | - | 357 | WP_003414166.1 | type II toxin-antitoxin system toxin endoribonuclease MazF9 | Toxin |
BCGR_RS14470 | 3056733..3056963 | - | 231 | WP_003901465.1 | antitoxin MazE | Antitoxin |
BCGR_RS14475 | 3057006..3058049 | - | 1044 | WP_003414172.1 | DUF2293 domain-containing protein | - |
BCGR_RS21880 | 3058240..3058515 | + | 276 | WP_003911993.1 | DUF1778 domain-containing protein | - |
BCGR_RS21885 | 3058691..3058945 | - | 255 | WP_003917684.1 | hypothetical protein | - |
BCGR_RS14490 | 3059093..3059497 | + | 405 | WP_003414181.1 | hypothetical protein | - |
BCGR_RS14495 | 3059494..3059685 | + | 192 | WP_003414184.1 | hypothetical protein | - |
BCGR_RS14500 | 3059749..3061038 | + | 1290 | Protein_2828 | transposase family protein | - |
BCGR_RS14505 | 3061272..3061529 | + | 258 | WP_003899489.1 | hypothetical protein | - |
BCGR_RS14510 | 3061634..3061945 | + | 312 | WP_010950777.1 | hypothetical protein | - |
Associated MGEs
MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
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Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 119 a.a. Molecular weight: 12858.73 Da Isoelectric Point: 9.1962
>T48636 WP_003414166.1 NZ_CP009243:c3056749-3056393 [Mycobacterium tuberculosis variant bovis BCG]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS
Download Length: 357 bp
>T48636 NZ_CP009243:c3056749-3056393 [Mycobacterium tuberculosis variant bovis BCG]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG
Antitoxin
Download Length: 77 a.a. Molecular weight: 8231.01 Da Isoelectric Point: 4.1809
>AT48636 WP_003901465.1 NZ_CP009243:c3056963-3056733 [Mycobacterium tuberculosis variant bovis BCG]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR
Download Length: 231 bp
>AT48636 NZ_CP009243:c3056963-3056733 [Mycobacterium tuberculosis variant bovis BCG]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA
Similar Proteins
Only experimentally validated proteins are listed.
Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
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