Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 3043096..3043666 Replicon chromosome
Accession NZ_CP008744
Organism Mycobacterium tuberculosis variant bovis BCG strain 3281

Toxin (Protein)


Gene name mazF Uniprot ID P71650
Locus tag GS11_RS14400 Protein ID WP_003414166.1
Coordinates 3043096..3043452 (-) Length 119 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P0CL61
Locus tag GS11_RS14405 Protein ID WP_003901465.1
Coordinates 3043436..3043666 (-) Length 77 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GS11_RS14380 3038548..3040236 - 1689 WP_003414155.1 alpha/beta hydrolase family protein -
GS11_RS14385 3040240..3040566 - 327 WP_003414157.1 hypothetical protein -
GS11_RS14390 3040739..3041326 + 588 WP_003914429.1 DUF3558 family protein -
GS11_RS14395 3041345..3042994 + 1650 WP_003899485.1 CocE/NonD family hydrolase -
GS11_RS14400 3043096..3043452 - 357 WP_003414166.1 type II toxin-antitoxin system toxin endoribonuclease MazF9 Toxin
GS11_RS14405 3043436..3043666 - 231 WP_003901465.1 antitoxin MazE Antitoxin
GS11_RS14410 3043709..3044752 - 1044 WP_003414172.1 DUF2293 domain-containing protein -
GS11_RS22085 3044943..3045218 + 276 WP_003911993.1 DUF1778 domain-containing protein -
GS11_RS22090 3045394..3045648 - 255 WP_003917684.1 hypothetical protein -
GS11_RS14425 3045796..3046200 + 405 WP_003414181.1 hypothetical protein -
GS11_RS14430 3046197..3046388 + 192 WP_003414184.1 hypothetical protein -
GS11_RS14435 3046452..3047741 + 1290 Protein_2813 transposase family protein -
GS11_RS14440 3047975..3048232 + 258 WP_003899489.1 hypothetical protein -
GS11_RS14445 3048337..3048648 + 312 WP_010950777.1 hypothetical protein -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(3-113)

Antitoxin

(3-29)


Sequences


Toxin        


Download         Length: 119 a.a.        Molecular weight: 12858.73 Da        Isoelectric Point: 9.1962

>T47392 WP_003414166.1 NZ_CP008744:c3043452-3043096 [Mycobacterium tuberculosis variant bovis BCG]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS

Download         Length: 357 bp

>T47392 NZ_CP008744:c3043452-3043096 [Mycobacterium tuberculosis variant bovis BCG]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8231.01 Da        Isoelectric Point: 4.1809

>AT47392 WP_003901465.1 NZ_CP008744:c3043666-3043436 [Mycobacterium tuberculosis variant bovis BCG]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR

Download         Length: 231 bp

>AT47392 NZ_CP008744:c3043666-3043436 [Mycobacterium tuberculosis variant bovis BCG]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 6L2A
PDB 5HJZ
PDB 6KYT
PDB 6L29
PDB 7DU5
PDB 6KYS


Antitoxin

Source ID Structure
PDB 7DU5
PDB 6KYT
AlphaFold DB A0A7U4FBW3

References