Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) mbcAT/RES-TIGR02293
Location 2191537..2192435 Replicon chromosome
Accession NZ_CP008744
Organism Mycobacterium tuberculosis variant bovis BCG strain 3281

Toxin (Protein)


Gene name mbcT Uniprot ID P64908
Locus tag GS11_RS10205 Protein ID WP_003410001.1
Coordinates 2191537..2192097 (-) Length 187 a.a.

Antitoxin (Protein)


Gene name mbcA Uniprot ID P64910
Locus tag GS11_RS10210 Protein ID WP_003410003.1
Coordinates 2192094..2192435 (-) Length 114 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
GS11_RS10175 2187169..2187576 - 408 WP_003409913.1 type II toxin-antitoxin system VapC family toxin -
GS11_RS10180 2187580..2187852 - 273 WP_003899100.1 type II toxin-antitoxin system Phd/YefM family antitoxin -
GS11_RS10185 2187885..2189105 - 1221 WP_003409919.1 TetR family transcriptional regulator Mce3R -
GS11_RS10195 2190004..2190309 + 306 Protein_1989 ABC transporter permease -
GS11_RS10200 2190493..2191017 + 525 WP_011799234.1 methyltransferase -
GS11_RS10205 2191537..2192097 - 561 WP_003410001.1 RES family NAD+ phosphorylase Toxin
GS11_RS10210 2192094..2192435 - 342 WP_003410003.1 DUF2384 domain-containing protein Antitoxin
GS11_RS10215 2192521..2192778 + 258 WP_003410006.1 hypothetical protein -
GS11_RS10220 2192679..2193014 - 336 WP_003410009.1 dehydrogenase -
GS11_RS10225 2193103..2193447 - 345 WP_003410010.1 type II toxin-antitoxin system toxin endoribonuclease MazF6 -
GS11_RS10230 2193441..2193689 - 249 WP_003410014.1 ribbon-helix-helix protein, CopG family -
GS11_RS10235 2193789..2196104 - 2316 WP_003899120.1 cation transporter ATPase CptG -
GS11_RS10240 2196101..2196373 - 273 WP_003410017.1 DUF1490 family protein -
GS11_RS10245 2196426..2196782 - 357 WP_003410018.1 Cd(II)/Pb(II)-sensing metalloregulatory transcriptional regulator CmtR -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin

(25-148)

Antitoxin

(69-110)


Sequences


Toxin        


Download         Length: 187 a.a.        Molecular weight: 20248.70 Da        Isoelectric Point: 4.5091

>T47377 WP_003410001.1 NZ_CP008744:c2192097-2191537 [Mycobacterium tuberculosis variant bovis BCG]
VSDALDEGLVQRIDARGTIEWSETCYRYTGAHRDALSGEGARRFGGRWNPPLLFPAIYLADSAQACMVEVERAAQAASTT
AEKMLEAAYRLHTIDVTDLAVLDLTTPQAREAVGLENDDIYGDDWSGCQAVGHAAWFLHMQGVLVPAAGGVGLVVTAYEQ
RTRPGQLQLRQSVDLTPALYQELRAT

Download         Length: 561 bp

>T47377 NZ_CP008744:c2192097-2191537 [Mycobacterium tuberculosis variant bovis BCG]
GTGAGCGATGCCCTCGATGAAGGGCTCGTCCAGCGTATCGACGCACGCGGAACAATTGAGTGGTCGGAAACGTGCTACCG
GTATACCGGCGCGCACCGTGACGCCTTGTCCGGTGAGGGCGCGCGCAGATTCGGAGGCAGGTGGAATCCGCCGCTGCTCT
TTCCGGCGATCTATCTTGCTGATTCCGCCCAAGCCTGCATGGTTGAGGTGGAACGGGCGGCGCAAGCGGCTTCAACGACC
GCAGAGAAGATGCTCGAGGCGGCCTACCGACTACACACGATCGACGTCACGGACCTGGCCGTCCTCGATCTGACAACCCC
GCAAGCTCGGGAAGCCGTGGGGCTCGAGAACGACGACATCTATGGCGACGACTGGTCAGGGTGCCAGGCGGTCGGACATG
CGGCCTGGTTCTTGCACATGCAAGGTGTCCTCGTGCCGGCGGCGGGCGGTGTCGGCCTCGTTGTCACCGCGTATGAACAG
CGAACTCGGCCGGGCCAACTACAACTGCGACAAAGCGTCGATCTGACGCCTGCTCTTTACCAAGAACTTCGAGCCACGTA
G

Antitoxin


Download         Length: 114 a.a.        Molecular weight: 12488.33 Da        Isoelectric Point: 4.8359

>AT47377 WP_003410003.1 NZ_CP008744:c2192435-2192094 [Mycobacterium tuberculosis variant bovis BCG]
MGVNVLASTVSGAIERLGLTYEEVGDIVDASPRSVARWTAGQVVPQRLNKQRLIELAYVADALAEVLPRDQANVWMFSPN
RLLEHRKPADLVRDGEYQRVLALIDAMAEGVFV

Download         Length: 342 bp

>AT47377 NZ_CP008744:c2192435-2192094 [Mycobacterium tuberculosis variant bovis BCG]
ATGGGAGTAAATGTGCTCGCCTCGACCGTGTCGGGTGCGATCGAGCGCTTGGGATTGACCTACGAGGAAGTCGGTGACAT
CGTCGATGCCTCGCCGCGTTCCGTGGCGCGATGGACCGCAGGTCAGGTGGTTCCCCAACGCCTCAACAAGCAACGACTTA
TCGAGCTGGCCTATGTCGCCGACGCCCTCGCGGAAGTGCTGCCGCGTGACCAGGCGAACGTGTGGATGTTTTCGCCGAAT
CGGTTACTGGAACACCGCAAGCCTGCCGACCTCGTGCGAGACGGCGAGTACCAACGCGTGTTGGCGCTCATCGACGCGAT
GGCGGAGGGAGTGTTCGTGTGA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
PDB 6FKG


Antitoxin

Source ID Structure
PDB 6FKG
AlphaFold DB A0A7U4FAE4

References