46187

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) EcnAB/-
Location 424724..425085 Replicon chromosome
Accession NZ_CP007221
Organism Xanthomonas oryzae pv. oryzicola strain CFBP7342

Toxin (Protein)


Gene name EcnB Uniprot ID G7TLC7
Locus tag BE73_RS01820 Protein ID WP_011257368.1
Coordinates 424951..425085 (+) Length 45 a.a.

Antitoxin (Protein)


Gene name EcnA Uniprot ID G7TLC8
Locus tag BE73_RS01815 Protein ID WP_011407410.1
Coordinates 424724..424876 (+) Length 51 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
BE73_RS01790 421065..421748 - 684 WP_014505034.1 dTMP kinase -
BE73_RS01795 422228..422520 - 293 Protein_355 hypothetical protein -
BE73_RS01800 422530..422765 - 236 Protein_356 GTPase -
BE73_RS01805 422762..423235 - 474 WP_033005008.1 hypothetical protein -
BE73_RS27245 423279..423557 + 279 WP_162484707.1 hypothetical protein -
BE73_RS01810 423693..424616 + 924 WP_014505030.1 arginase -
BE73_RS01815 424724..424876 + 153 WP_011407410.1 entericidin A/B family lipoprotein Antitoxin
BE73_RS01820 424951..425085 + 135 WP_011257368.1 entericidin A/B family lipoprotein Toxin
BE73_RS01825 425329..425538 + 210 WP_011407411.1 CsbD family protein -
BE73_RS01830 425707..426996 + 1290 WP_044749696.1 tryptophan--tRNA ligase -
BE73_RS01835 427049..428071 + 1023 WP_076342527.1 MBL fold metallo-hydrolase -
BE73_RS01840 428158..429216 + 1059 WP_044749699.1 IS630 family transposase -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Entericidin A/B

(23-42)

Antitoxin

Entericidin A/B

(23-42)


Sequences

Toxin        


Download         Length: 45 a.a.        Molecular weight: 4457.33 Da        Isoelectric Point: 10.2040

>T46187 WP_011257368.1 NZ_CP007221:424951-425085 [Xanthomonas oryzae pv. oryzicola]
MKRAIVLLVLSMLSVGLLSGCNTVAGAGKDVKGAGEKVEDAARK

Download         Length: 135 bp

>T46187 NZ_CP007221:424951-425085 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGTGCAATTGTGCTGCTGGTGCTGTCCATGTTGTCGGTCGGTCTGCTGTCGGGCTGCAACACCGTCGCAGGTGC
CGGCAAGGACGTGAAGGGCGCCGGCGAGAAGGTGGAAGACGCAGCGCGTAAGTAA

Antitoxin


Download         Length: 51 a.a.        Molecular weight: 5046.99 Da        Isoelectric Point: 8.7942

>AT46187 WP_011407410.1 NZ_CP007221:424724-424876 [Xanthomonas oryzae pv. oryzicola]
MKRLLTLMVLGLFSAGVMTGCNTVAGAGKDLQGAGGKVEKTAEKCSDGKC

Download         Length: 153 bp

>AT46187 NZ_CP007221:424724-424876 [Xanthomonas oryzae pv. oryzicola]
ATGAAGCGACTGCTGACACTGATGGTGCTGGGCCTGTTTTCGGCCGGCGTGATGACGGGCTGCAACACCGTGGCTGGCGC
TGGCAAGGACTTGCAGGGCGCGGGTGGGAAGGTCGAGAAAACGGCCGAAAAATGCAGCGATGGTAAGTGCTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
AlphaFold DB A0A0C5UG40

Antitoxin

Source ID Structure
AlphaFold DB A0A0C5V759

References