44645

Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) mazEF/MazF(toxin)
Location 3101026..3101596 Replicon chromosome
Accession NZ_CP002871
Organism Mycobacterium tuberculosis HKBS1

Toxin (Protein)


Gene name mazF Uniprot ID P71650
Locus tag HKBS1_RS14730 Protein ID WP_003414166.1
Coordinates 3101026..3101382 (-) Length 119 a.a.

Antitoxin (Protein)


Gene name mazE Uniprot ID P0CL61
Locus tag HKBS1_RS14735 Protein ID WP_003901465.1
Coordinates 3101366..3101596 (-) Length 77 a.a.

Genomic Context

Locus tag Coordinates Strand Size (bp) Protein ID Product Description
HKBS1_RS14710 3096478..3098166 - 1689 WP_003414155.1 alpha/beta hydrolase family protein -
HKBS1_RS14715 3098170..3098496 - 327 WP_003414157.1 hypothetical protein -
HKBS1_RS14720 3098669..3099256 + 588 WP_003914429.1 DUF3558 family protein -
HKBS1_RS14725 3099275..3100924 + 1650 WP_003899485.1 CocE/NonD family hydrolase -
HKBS1_RS14730 3101026..3101382 - 357 WP_003414166.1 type II toxin-antitoxin system toxin endoribonuclease MazF9 Toxin
HKBS1_RS14735 3101366..3101596 - 231 WP_003901465.1 antitoxin MazE Antitoxin
HKBS1_RS14740 3101639..3102682 - 1044 WP_003414172.1 DUF2293 domain-containing protein -
HKBS1_RS22245 3102873..3103148 + 276 WP_003911993.1 DUF1778 domain-containing protein -
HKBS1_RS22630 3103324..3103578 - 255 WP_003917684.1 hypothetical protein -
HKBS1_RS14755 3103726..3104130 + 405 WP_003414181.1 hypothetical protein -
HKBS1_RS14760 3104127..3104318 + 192 WP_003414184.1 hypothetical protein -
HKBS1_RS14765 3104382..3105671 + 1290 Protein_2895 transposase family protein -
HKBS1_RS14770 3105905..3106162 + 258 WP_003899489.1 hypothetical protein -
HKBS1_RS14775 3106267..3106578 + 312 WP_003414190.1 hypothetical protein -

Associated MGEs

MGE
detail		 Similar
MGEs		 Relative
position		 MGE Type Cargo ARG Virulence gene Coordinates Length (bp)


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

mRNA interferase PemK-like

(3-113)

Antitoxin

Ribbon-helix-helix protein, CopG

(3-29)


Sequences

Toxin        


Download         Length: 119 a.a.        Molecular weight: 12858.73 Da        Isoelectric Point: 9.1962

>T44645 WP_003414166.1 NZ_CP002871:c3101382-3101026 [Mycobacterium tuberculosis HKBS1]
VMRRGEIWQVDLDPARGSEANNQRPAVVVSNDRANATATRLGRGVITVVPVTSNIAKVYPFQVLLSATTTGLQVDCKAQA
EQIRSIATERLLRPIGRVSAAELAQLDEALKLHLDLWS

Download         Length: 357 bp

>T44645 NZ_CP002871:c3101382-3101026 [Mycobacterium tuberculosis HKBS1]
GTGATGCGCCGCGGTGAGATTTGGCAGGTCGATCTCGACCCCGCTCGAGGTAGCGAAGCGAACAACCAGCGCCCCGCCGT
CGTCGTCAGCAACGACCGGGCCAACGCGACCGCCACGCGTCTTGGGCGCGGCGTCATCACCGTCGTGCCGGTGACGAGCA
ACATCGCCAAGGTCTATCCGTTTCAGGTGTTGTTGTCGGCCACCACTACTGGTCTCCAGGTCGACTGCAAGGCGCAGGCC
GAGCAAATCAGATCGATTGCTACCGAGCGGTTGCTCCGGCCAATCGGCCGAGTTTCAGCCGCCGAACTTGCCCAGCTCGA
TGAGGCTTTGAAACTGCATCTCGACTTATGGTCGTAG

Antitoxin


Download         Length: 77 a.a.        Molecular weight: 8231.01 Da        Isoelectric Point: 4.1809

>AT44645 WP_003901465.1 NZ_CP002871:c3101596-3101366 [Mycobacterium tuberculosis HKBS1]
VKLSVSLSDDDVAILDAYVKRAGLPSRSAGLQHAIRVLRYPTLEDDYANAWQEWSAAGDTDAWEQTVGDGVGDAPR

Download         Length: 231 bp

>AT44645 NZ_CP002871:c3101596-3101366 [Mycobacterium tuberculosis HKBS1]
GTGAAGTTGAGCGTGAGCCTGTCCGATGACGACGTCGCGATCCTGGACGCATATGTGAAACGAGCGGGATTACCATCCCG
CTCCGCCGGCCTGCAGCATGCGATCCGCGTGCTTCGCTACCCCACGCTCGAAGATGACTATGCCAACGCATGGCAAGAAT
GGTCGGCAGCCGGCGACACGGACGCGTGGGAGCAGACCGTCGGCGACGGAGTCGGTGATGCGCCGCGGTGA

Similar Proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures

Toxin

Source ID Structure
PDB 6L2A
PDB 5HJZ
PDB 6KYT
PDB 6L29
PDB 7DU5
PDB 6KYS

Antitoxin

Source ID Structure
AlphaFold DB A0A7U4FBW3

References