Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 841302..842083 | Replicon | chromosome |
| Accession | NZ_AP028041 | ||
| Organism | Phytobacter diazotrophicus strain TA9730 | ||
Toxin (Protein)
| Gene name | TacT2 | Uniprot ID | - |
| Locus tag | QUE90_RS04010 | Protein ID | WP_125123871.1 |
| Coordinates | 841592..842083 (+) | Length | 164 a.a. |
Antitoxin (Protein)
| Gene name | TacA2 | Uniprot ID | - |
| Locus tag | QUE90_RS04005 | Protein ID | WP_125123870.1 |
| Coordinates | 841302..841595 (+) | Length | 98 a.a. |
Genomic Context
Location: 838298..838438 (141 bp)
Type: Others
Protein ID: Protein_785
Type: Others
Protein ID: Protein_785
Location: 841302..841595 (294 bp)
Type: Antitoxin
Protein ID: WP_125123870.1
Type: Antitoxin
Protein ID: WP_125123870.1
Location: 841592..842083 (492 bp)
Type: Toxin
Protein ID: WP_125123871.1
Type: Toxin
Protein ID: WP_125123871.1
Location: 842148..842642 (495 bp)
Type: Others
Protein ID: WP_232034376.1
Type: Others
Protein ID: WP_232034376.1
Location: 843502..844653 (1152 bp)
Type: Others
Protein ID: Protein_791
Type: Others
Protein ID: Protein_791
Location: 838512..840701 (2190 bp)
Type: Others
Protein ID: WP_125123869.1
Type: Others
Protein ID: WP_125123869.1
Location: 842832..843347 (516 bp)
Type: Others
Protein ID: WP_125123872.1
Type: Others
Protein ID: WP_125123872.1
Location: 845063..845659 (597 bp)
Type: Others
Protein ID: WP_047749132.1
Type: Others
Protein ID: WP_047749132.1
Location: 845659..846003 (345 bp)
Type: Others
Protein ID: WP_047749131.1
Type: Others
Protein ID: WP_047749131.1
Location: 846015..846563 (549 bp)
Type: Others
Protein ID: WP_047749130.1
Type: Others
Protein ID: WP_047749130.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QUE90_RS03995 (838298) | 838298..838438 | + | 141 | Protein_785 | DUF1778 domain-containing protein | - |
| QUE90_RS04000 (838512) | 838512..840701 | - | 2190 | WP_125123869.1 | TonB-dependent siderophore receptor | - |
| QUE90_RS04005 (841302) | 841302..841595 | + | 294 | WP_125123870.1 | DUF1778 domain-containing protein | Antitoxin |
| QUE90_RS04010 (841592) | 841592..842083 | + | 492 | WP_125123871.1 | GNAT family N-acetyltransferase | Toxin |
| QUE90_RS04015 (842148) | 842148..842642 | + | 495 | WP_232034376.1 | hypothetical protein | - |
| QUE90_RS04020 (842832) | 842832..843347 | - | 516 | WP_125123872.1 | hypothetical protein | - |
| QUE90_RS04025 (843502) | 843502..844653 | + | 1152 | Protein_791 | IS3 family transposase | - |
| QUE90_RS04030 (845063) | 845063..845659 | - | 597 | WP_047749132.1 | hypothetical protein | - |
| QUE90_RS04035 (845659) | 845659..846003 | - | 345 | WP_047749131.1 | hypothetical protein | - |
| QUE90_RS04040 (846015) | 846015..846563 | - | 549 | WP_047749130.1 | recombinase family protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 164 a.a. Molecular weight: 17721.58 Da Isoelectric Point: 7.2655
>T44393 WP_125123871.1 NZ_AP028041:841592-842083 [Phytobacter diazotrophicus]
MISAPEPLHTGHILTPFCCGMDSMDKWLKQRAMKNQVTGASRTFVCCGSDSNVQAYYSLASSAVTTNTAPGRFRRNMPDP
IPVVVLGRLAVDQSLHGQGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLV
ESI
MISAPEPLHTGHILTPFCCGMDSMDKWLKQRAMKNQVTGASRTFVCCGSDSNVQAYYSLASSAVTTNTAPGRFRRNMPDP
IPVVVLGRLAVDQSLHGQGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLV
ESI
Download Length: 492 bp
>T44393 NZ_AP028041:841592-842083 [Phytobacter diazotrophicus]
ATGATCTCTGCTCCAGAACCGCTTCATACCGGGCATATTCTTACCCCGTTCTGTTGCGGCATGGATTCTATGGATAAGTG
GCTCAAACAACGGGCGATGAAAAATCAGGTCACTGGCGCATCGCGTACCTTTGTATGTTGCGGCAGCGATTCTAACGTAC
AGGCGTATTACTCGCTGGCGTCCAGCGCGGTAACGACCAACACCGCCCCCGGTCGCTTTCGTCGCAATATGCCCGATCCG
ATCCCGGTGGTGGTGCTGGGACGTCTGGCTGTGGATCAATCACTGCACGGGCAGGGCGTCGGGCGGGCGCTGGTTCGCGA
CGCCGGGCTGCGGGTTATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTGCACGCCCTGTCGGATGAAGCGC
GGGAGTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGGGGGATTTGGTG
GAGAGTATTTAG
ATGATCTCTGCTCCAGAACCGCTTCATACCGGGCATATTCTTACCCCGTTCTGTTGCGGCATGGATTCTATGGATAAGTG
GCTCAAACAACGGGCGATGAAAAATCAGGTCACTGGCGCATCGCGTACCTTTGTATGTTGCGGCAGCGATTCTAACGTAC
AGGCGTATTACTCGCTGGCGTCCAGCGCGGTAACGACCAACACCGCCCCCGGTCGCTTTCGTCGCAATATGCCCGATCCG
ATCCCGGTGGTGGTGCTGGGACGTCTGGCTGTGGATCAATCACTGCACGGGCAGGGCGTCGGGCGGGCGCTGGTTCGCGA
CGCCGGGCTGCGGGTTATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTGCACGCCCTGTCGGATGAAGCGC
GGGAGTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGGGGGATTTGGTG
GAGAGTATTTAG
Antitoxin
Download Length: 98 a.a. Molecular weight: 10931.55 Da Isoelectric Point: 8.6351
>AT44393 WP_125123870.1 NZ_AP028041:841302-841595 [Phytobacter diazotrophicus]
MPAANSMAMKRETLNLRIRPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYEEFLARLDQAPAPN
AALRKTMQTPAPWEQEK
MPAANSMAMKRETLNLRIRPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYEEFLARLDQAPAPN
AALRKTMQTPAPWEQEK
Download Length: 294 bp
>AT44393 NZ_AP028041:841302-841595 [Phytobacter diazotrophicus]
ATGCCAGCCGCAAACAGTATGGCGATGAAACGCGAAACTCTGAATCTGCGCATCAGGCCCGCCGAGCGTGATCTTATCGA
CCGGGCAGCGAAGGCCAGAGGGAAAAACCGCACTGACTTTGTGCTGGAAGCCGCCCGCGCTGCCGCTGAGGAAGCGTTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATGAGGAGTTTCTGGCTCGTCTAGATCAGGCGCCTGCGCCTAAC
GCTGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAGCAGGAAAAATGA
ATGCCAGCCGCAAACAGTATGGCGATGAAACGCGAAACTCTGAATCTGCGCATCAGGCCCGCCGAGCGTGATCTTATCGA
CCGGGCAGCGAAGGCCAGAGGGAAAAACCGCACTGACTTTGTGCTGGAAGCCGCCCGCGCTGCCGCTGAGGAAGCGTTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATGAGGAGTTTCTGGCTCGTCTAGATCAGGCGCCTGCGCCTAAC
GCTGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAGCAGGAAAAATGA