43839

Detailed information of TA system    

insolicoBioinformatically predicted

Overview


TA module


Type II Classification (family/domain) TsxAB/Xre(antitoxin)
Location 7032..7533 Replicon plasmid pEC521_1
Accession NZ_AP027410
Organism Escherichia coli strain EC521 isolate EC521

Toxin (Protein)


Gene name TsxA Uniprot ID H1ZXU8
Locus tag QUE69_RS00365 Protein ID WP_000702247.1
Coordinates 7032..7292 (+) Length 87 a.a.

Antitoxin (Protein)


Gene name TsxB Uniprot ID -
Locus tag QUE69_RS00370 Protein ID WP_001132407.1
Coordinates 7282..7533 (+) Length 84 a.a.

Genomic Context


Locus tag Coordinates Strand Size (bp) Protein ID Product Description
QUE69_RS00320 (MUTS4_00640) 2570..2722 + 153 Protein_2 DUF5431 family protein -
QUE69_RS00325 2667..2789 + 123 WP_223170659.1 type I toxin-antitoxin system Hok family toxin -
QUE69_RS00330 (MUTS4_00650) 2939..3535 + 597 WP_000125165.1 ProQ/FINO family protein -
QUE69_RS00335 (MUTS4_00660) 3553..3837 - 285 WP_001162371.1 hypothetical protein -
QUE69_RS00340 (MUTS4_00670) 3911..4576 - 666 WP_000532148.1 division plane positioning ATPase MipZ -
QUE69_RS00345 (MUTS4_00680) 5174..5503 + 330 WP_000855120.1 hypothetical protein -
QUE69_RS00350 (MUTS4_00690) 6085..6408 + 324 WP_000427403.1 hypothetical protein -
QUE69_RS00355 (MUTS4_00700) 6450..6659 + 210 WP_000866036.1 hypothetical protein -
QUE69_RS00360 (MUTS4_00710) 6756..6980 + 225 WP_000814381.1 hypothetical protein -
QUE69_RS00365 (MUTS4_00720) 7032..7292 + 261 WP_000702247.1 hypothetical protein Toxin
QUE69_RS00370 (MUTS4_00730) 7282..7533 + 252 WP_001132407.1 transcriptional regulator Antitoxin
QUE69_RS00375 (MUTS4_00740) 8083..8361 + 279 WP_000545938.1 hypothetical protein -
QUE69_RS00380 (MUTS4_00760) 8781..9047 + 267 WP_000681608.1 type II toxin-antitoxin system HicB family antitoxin -
QUE69_RS00385 (MUTS4_00770) 9154..9597 - 444 WP_000068545.1 hypothetical protein -
QUE69_RS00390 (MUTS4_00780) 9894..10076 + 183 WP_000833470.1 type II toxin-antitoxin system HicA family toxin -
QUE69_RS00395 (MUTS4_00790) 10101..10538 + 438 WP_000466318.1 type II toxin-antitoxin system HicB family antitoxin -
QUE69_RS00400 (MUTS4_00800) 10669..10995 - 327 WP_063078684.1 hypothetical protein -
QUE69_RS00405 (MUTS4_00810) 11015..11722 - 708 WP_021503228.1 hypothetical protein -
QUE69_RS00410 (MUTS4_00820) 11724..12476 - 753 WP_063078685.1 conjugal transfer protein TraL -

Associated MGEs


MGE
detail
Similar
MGEs
Relative
position
MGE Type Cargo ARG Virulence gene Coordinates Length (bp)
- inside Mobilizable plasmid mcr-1.1 - 1..60712 60712


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains


Predicted by InterproScan

Toxin


No domain identified.


Antitoxin

(8-37)


Sequences


Toxin        


Download         Length: 87 a.a.        Molecular weight: 9817.29 Da        Isoelectric Point: 10.0665

>T43839 WP_000702247.1 NZ_AP027410:7032-7292 [Escherichia coli]
MKIRKGDRQYYLNKEGDTFHLVKRVKTFSKSATLGKTKATVKTVADLVFHEKAFDTIDFASDGLRENDKEIVSMMIQEMS
EGKNAK

Download         Length: 261 bp

>T43839 NZ_AP027410:7032-7292 [Escherichia coli]
ATGAAGATAAGAAAAGGTGACAGACAATATTATCTGAATAAAGAAGGTGATACGTTTCATCTGGTGAAGCGAGTAAAAAC
TTTTTCTAAGTCTGCGACTTTAGGAAAAACGAAAGCAACGGTGAAAACTGTTGCCGATCTTGTTTTTCATGAGAAGGCAT
TCGACACTATCGACTTTGCCAGCGACGGATTAAGAGAGAATGATAAAGAAATTGTTTCTATGATGATTCAGGAAATGAGT
GAGGGAAAAAATGCCAAATGA

Antitoxin


Download         Length: 84 a.a.        Molecular weight: 9404.77 Da        Isoelectric Point: 9.8120

>AT43839 WP_001132407.1 NZ_AP027410:7282-7533 [Escherichia coli]
MPNENTPENIKRLRQKIGLTQKECAEIFSMSPRTWRRKEEPVGTASGTALTPVEFKFLLLLAGEHPDYVLCKRNKKNSDS
GSN

Download         Length: 252 bp

>AT43839 NZ_AP027410:7282-7533 [Escherichia coli]
ATGCCAAATGAAAACACACCAGAAAACATTAAACGTCTGCGGCAAAAAATTGGCCTGACACAGAAAGAATGTGCCGAAAT
ATTTAGCATGAGTCCGCGTACCTGGCGTCGCAAAGAAGAACCTGTCGGAACTGCAAGCGGTACAGCACTTACACCAGTAG
AGTTTAAATTTCTTCTGCTTTTAGCTGGAGAACACCCTGATTATGTACTTTGTAAAAGGAATAAAAAGAATTCTGATTCT
GGAAGTAATTAA

Similar Proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
Protein Organism Identities (%) Coverage (%) Ha-value

Structures


Toxin

Source ID Structure
AlphaFold DB A0A1P8DNC0


Antitoxin

Source ID Structure

References