Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | relBE/YoeB-YefM |
| Location | 1371721..1372226 | Replicon | chromosome |
| Accession | NZ_AP027142 | ||
| Organism | Methylocystis iwaonis strain SS37A-Re | ||
Toxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QMG84_RS06555 | Protein ID | WP_281931274.1 |
| Coordinates | 1371972..1372226 (+) | Length | 85 a.a. |
Antitoxin (Protein)
| Gene name | relE | Uniprot ID | - |
| Locus tag | QMG84_RS06550 | Protein ID | WP_165047956.1 |
| Coordinates | 1371721..1371975 (+) | Length | 85 a.a. |
Genomic Context
Location: 1367889..1368161 (273 bp)
Type: Others
Protein ID: WP_281931268.1
Type: Others
Protein ID: WP_281931268.1
Location: 1368342..1368989 (648 bp)
Type: Others
Protein ID: WP_281931270.1
Type: Others
Protein ID: WP_281931270.1
Location: 1369225..1369719 (495 bp)
Type: Others
Protein ID: WP_281931271.1
Type: Others
Protein ID: WP_281931271.1
Location: 1369861..1371669 (1809 bp)
Type: Others
Protein ID: WP_281931272.1
Type: Others
Protein ID: WP_281931272.1
Location: 1371721..1371975 (255 bp)
Type: Antitoxin
Protein ID: WP_165047956.1
Type: Antitoxin
Protein ID: WP_165047956.1
Location: 1371972..1372226 (255 bp)
Type: Toxin
Protein ID: WP_281931274.1
Type: Toxin
Protein ID: WP_281931274.1
Location: 1372588..1372671 (84 bp)
Type: Others
Protein ID: WP_281931936.1
Type: Others
Protein ID: WP_281931936.1
Location: 1375336..1375668 (333 bp)
Type: Others
Protein ID: WP_281931280.1
Type: Others
Protein ID: WP_281931280.1
Location: 1375757..1376020 (264 bp)
Type: Others
Protein ID: WP_281931282.1
Type: Others
Protein ID: WP_281931282.1
Location: 1372726..1373628 (903 bp)
Type: Others
Protein ID: WP_281931276.1
Type: Others
Protein ID: WP_281931276.1
Location: 1373746..1374480 (735 bp)
Type: Others
Protein ID: WP_281931277.1
Type: Others
Protein ID: WP_281931277.1
Location: 1374534..1375235 (702 bp)
Type: Others
Protein ID: WP_281931279.1
Type: Others
Protein ID: WP_281931279.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| QMG84_RS06530 (SS37A_12880) | 1367889..1368161 | + | 273 | WP_281931268.1 | hypothetical protein | - |
| QMG84_RS06535 (SS37A_12890) | 1368342..1368989 | + | 648 | WP_281931270.1 | hypothetical protein | - |
| QMG84_RS06540 (SS37A_12900) | 1369225..1369719 | + | 495 | WP_281931271.1 | hypothetical protein | - |
| QMG84_RS06545 (SS37A_12910) | 1369861..1371669 | + | 1809 | WP_281931272.1 | translation elongation factor 4 | - |
| QMG84_RS06550 (SS37A_12920) | 1371721..1371975 | + | 255 | WP_165047956.1 | type II toxin-antitoxin system prevent-host-death family antitoxin | Antitoxin |
| QMG84_RS06555 (SS37A_12930) | 1371972..1372226 | + | 255 | WP_281931274.1 | Txe/YoeB family addiction module toxin | Toxin |
| QMG84_RS06560 | 1372588..1372671 | + | 84 | WP_281931936.1 | hypothetical protein | - |
| QMG84_RS06565 (SS37A_12940) | 1372726..1373628 | - | 903 | WP_281931276.1 | EamA family transporter | - |
| QMG84_RS06570 (SS37A_12950) | 1373746..1374480 | - | 735 | WP_281931277.1 | class I SAM-dependent methyltransferase | - |
| QMG84_RS06575 (SS37A_12960) | 1374534..1375235 | - | 702 | WP_281931279.1 | MOSC domain-containing protein | - |
| QMG84_RS06580 (SS37A_12970) | 1375336..1375668 | + | 333 | WP_281931280.1 | hypothetical protein | - |
| QMG84_RS06585 (SS37A_12980) | 1375757..1376020 | + | 264 | WP_281931282.1 | hypothetical protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 85 a.a. Molecular weight: 10065.54 Da Isoelectric Point: 8.5222
>T43032 WP_281931274.1 NZ_AP027142:1371972-1372226 [Methylocystis iwaonis]
MKLIFSESAWEDYLHWQAQDAKILERINSLIKECQRTPFTGTGKPEPLRGDLRGWWSRRITLEHRLVYRVEGESLLIAQC
RHHY
MKLIFSESAWEDYLHWQAQDAKILERINSLIKECQRTPFTGTGKPEPLRGDLRGWWSRRITLEHRLVYRVEGESLLIAQC
RHHY
Download Length: 255 bp
>T43032 NZ_AP027142:1371972-1372226 [Methylocystis iwaonis]
ATGAAGCTCATCTTCTCGGAAAGCGCCTGGGAGGATTATCTCCACTGGCAGGCGCAGGACGCGAAGATTCTCGAACGCAT
TAATTCACTCATCAAGGAATGCCAGCGCACGCCTTTTACAGGCACTGGAAAGCCCGAGCCTTTGCGGGGGGATTTACGGG
GCTGGTGGTCTCGGCGGATTACGCTGGAGCATCGCCTGGTATATCGCGTCGAAGGCGAGAGCCTGCTGATTGCGCAGTGT
CGCCATCATTATTGA
ATGAAGCTCATCTTCTCGGAAAGCGCCTGGGAGGATTATCTCCACTGGCAGGCGCAGGACGCGAAGATTCTCGAACGCAT
TAATTCACTCATCAAGGAATGCCAGCGCACGCCTTTTACAGGCACTGGAAAGCCCGAGCCTTTGCGGGGGGATTTACGGG
GCTGGTGGTCTCGGCGGATTACGCTGGAGCATCGCCTGGTATATCGCGTCGAAGGCGAGAGCCTGCTGATTGCGCAGTGT
CGCCATCATTATTGA
Antitoxin
Download Length: 85 a.a. Molecular weight: 9335.52 Da Isoelectric Point: 5.1767
>AT43032 WP_165047956.1 NZ_AP027142:1371721-1371975 [Methylocystis iwaonis]
MRTTSYSDLRKNLAATLDRVTEDHEPVVITRDRGKPAAVLISLEDFASYEETAYLLKSPRNAERLLASIKELEAGGGAER
KLSE
MRTTSYSDLRKNLAATLDRVTEDHEPVVITRDRGKPAAVLISLEDFASYEETAYLLKSPRNAERLLASIKELEAGGGAER
KLSE
Download Length: 255 bp
>AT43032 NZ_AP027142:1371721-1371975 [Methylocystis iwaonis]
ATGCGCACGACCTCCTACAGCGACCTCCGGAAGAACCTCGCGGCCACGCTCGATCGCGTGACCGAGGACCACGAGCCTGT
CGTCATCACCCGTGACCGCGGAAAGCCGGCGGCCGTGCTGATCTCCCTCGAAGATTTCGCCTCCTATGAGGAGACGGCCT
ATCTGCTGAAAAGCCCGCGCAACGCCGAGCGCCTGCTTGCGTCGATCAAAGAACTCGAAGCTGGCGGCGGCGCAGAGCGT
AAGCTTTCCGAATGA
ATGCGCACGACCTCCTACAGCGACCTCCGGAAGAACCTCGCGGCCACGCTCGATCGCGTGACCGAGGACCACGAGCCTGT
CGTCATCACCCGTGACCGCGGAAAGCCGGCGGCCGTGCTGATCTCCCTCGAAGATTTCGCCTCCTATGAGGAGACGGCCT
ATCTGCTGAAAAGCCCGCGCAACGCCGAGCGCCTGCTTGCGTCGATCAAAGAACTCGAAGCTGGCGGCGGCGCAGAGCGT
AAGCTTTCCGAATGA