Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2290498..2290969 | Replicon | chromosome |
| Accession | NZ_AP026099 | ||
| Organism | Escherichia coli strain 61_150228 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | OO862_RS11785 | Protein ID | WP_001303511.1 |
| Coordinates | 2290691..2290969 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | OO862_RS11780 | Protein ID | WP_001302048.1 |
| Coordinates | 2290498..2290689 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO862_RS11740 (2285705) | 2285705..2286289 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO862_RS11745 (2286346) | 2286346..2286741 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO862_RS11750 (2286757) | 2286757..2287526 | - | 770 | Protein_2306 | DUF1627 domain-containing protein | - |
| OO862_RS11755 (2287552) | 2287552..2288292 | - | 741 | WP_000788938.1 | ATP-binding protein | - |
| OO862_RS11760 (2288299) | 2288299..2289261 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO862_RS11765 (2289284) | 2289284..2289709 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO862_RS11770 (2289706) | 2289706..2290008 | - | 303 | WP_000172738.1 | transcriptional regulator | - |
| OO862_RS11775 (2290106) | 2290106..2290477 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| OO862_RS11780 (2290498) | 2290498..2290689 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| OO862_RS11785 (2290691) | 2290691..2290969 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| OO862_RS11790 (2291321) | 2291321..2291620 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| OO862_RS11795 (2291692) | 2291692..2291910 | + | 219 | WP_001171930.1 | protein YdfC | - |
| OO862_RS11800 (2292479) | 2292479..2292667 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO862_RS11805 (2292664) | 2292664..2292855 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO862_RS11810 (2292948) | 2292948..2295419 | + | 2472 | WP_000048458.1 | exonuclease | - |
| OO862_RS11815 (2295492) | 2295492..2295743 | + | 252 | WP_000005552.1 | excisionase family protein | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 93 a.a. Molecular weight: 10661.25 Da Isoelectric Point: 5.5647
>T42103 WP_001303511.1 NZ_AP026099:2290691-2290969 [Escherichia coli]
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
Download Length: 279 bp
>T42103 NZ_AP026099:2290691-2290969 [Escherichia coli]
ATGTTACCCGTGTTATGGCTTGAAAGCGCAGATACCGACCTAGATGATATAACTAGTTATATTGCTCGTTTCGACATAGA
TGCGGCTGAACGCTTATGGCAGCGATTAAGGGGTTGTGTGCTGCCGTTATCCGAACATCCGTATTTATACCCACCAAGCG
ACAGAGTACCTGGCTTGCGTGAGATTGTAGCCCACCCTAACTATATAATTCTATACCGCGTAACAACATCAAGCGTTGAA
GTAGTAAACGTGATCCACGCAAGACGCCAGTTTCCCTAA
ATGTTACCCGTGTTATGGCTTGAAAGCGCAGATACCGACCTAGATGATATAACTAGTTATATTGCTCGTTTCGACATAGA
TGCGGCTGAACGCTTATGGCAGCGATTAAGGGGTTGTGTGCTGCCGTTATCCGAACATCCGTATTTATACCCACCAAGCG
ACAGAGTACCTGGCTTGCGTGAGATTGTAGCCCACCCTAACTATATAATTCTATACCGCGTAACAACATCAAGCGTTGAA
GTAGTAAACGTGATCCACGCAAGACGCCAGTTTCCCTAA
Antitoxin
Download Length: 64 a.a. Molecular weight: 7463.47 Da Isoelectric Point: 8.6828
>AT42103 WP_001302048.1 NZ_AP026099:2290498-2290689 [Escherichia coli]
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
Download Length: 192 bp
>AT42103 NZ_AP026099:2290498-2290689 [Escherichia coli]
ATGAATAGAGCCCTTTCACCAATGGTTTCTGAATTTGAAACCATTGAACAAGAAAACAGTTACAACGAATGGCTGCGTGC
GAAAGTAGCAACGAGCCTTGCAGATCCGCGCCCAGCAATTCCCCATGACGAAGTTGAGCGCAGAATGGCAGAACGCTTTG
CTAAGATGCGCAAGGAACGGAGCAAGCAGTAA
ATGAATAGAGCCCTTTCACCAATGGTTTCTGAATTTGAAACCATTGAACAAGAAAACAGTTACAACGAATGGCTGCGTGC
GAAAGTAGCAACGAGCCTTGCAGATCCGCGCCCAGCAATTCCCCATGACGAAGTTGAGCGCAGAATGGCAGAACGCTTTG
CTAAGATGCGCAAGGAACGGAGCAAGCAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|