Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | paaR-paaA-parE/- |
| Location | 2082010..2082481 | Replicon | chromosome |
| Accession | NZ_AP026097 | ||
| Organism | Escherichia coli strain 57_142493 | ||
Toxin (Protein)
| Gene name | parE_1 | Uniprot ID | A0A0D7C2L1 |
| Locus tag | OO832_RS10310 | Protein ID | WP_001303511.1 |
| Coordinates | 2082203..2082481 (+) | Length | 93 a.a. |
Antitoxin (Protein)
| Gene name | paaA | Uniprot ID | Q8XAD5 |
| Locus tag | OO832_RS10305 | Protein ID | WP_001302048.1 |
| Coordinates | 2082010..2082201 (+) | Length | 64 a.a. |
Genomic Context
| Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OO832_RS10265 (2077215) | 2077215..2077799 | - | 585 | WP_000206793.1 | DUF551 domain-containing protein | - |
| OO832_RS10270 (2077856) | 2077856..2078251 | - | 396 | WP_001118159.1 | DUF977 family protein | - |
| OO832_RS10275 (2078267) | 2078267..2079036 | - | 770 | Protein_2015 | DUF1627 domain-containing protein | - |
| OO832_RS10280 (2079062) | 2079062..2079802 | - | 741 | WP_000788939.1 | ATP-binding protein | - |
| OO832_RS10285 (2079809) | 2079809..2080771 | - | 963 | WP_000095669.1 | helix-turn-helix domain-containing protein | - |
| OO832_RS10290 (2080794) | 2080794..2081219 | - | 426 | WP_000693943.1 | toxin YdaT family protein | - |
| OO832_RS10295 (2081216) | 2081216..2081520 | - | 305 | Protein_2019 | transcriptional regulator | - |
| OO832_RS10300 (2081618) | 2081618..2081989 | + | 372 | WP_001169686.1 | hypothetical protein | - |
| OO832_RS10305 (2082010) | 2082010..2082201 | + | 192 | WP_001302048.1 | hypothetical protein | Antitoxin |
| OO832_RS10310 (2082203) | 2082203..2082481 | + | 279 | WP_001303511.1 | type II toxin-antitoxin system RelE/ParE family toxin | Toxin |
| OO832_RS10315 (2082833) | 2082833..2083132 | + | 300 | WP_001240334.1 | hypothetical protein | - |
| OO832_RS10320 (2083204) | 2083204..2083422 | + | 219 | WP_001171930.1 | protein YdfC | - |
| OO832_RS10325 (2083991) | 2083991..2084179 | + | 189 | WP_000449192.1 | cell division inhibition protein DicB | - |
| OO832_RS10330 (2084176) | 2084176..2084367 | + | 192 | WP_001090200.1 | DUF1482 family protein | - |
| OO832_RS10335 (2084460) | 2084460..2085545 | + | 1086 | Protein_2027 | exonuclease | - |
| OO832_RS10340 (2085596) | 2085596..2086809 | + | 1214 | WP_162829202.1 | IS3-like element IS1203 family transposase | - |
Associated MGEs
| MGE detail |
Similar MGEs |
Relative position |
MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| - | inside | Prophage | - | - | 2040020..2098673 | 58653 |
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 93 a.a. Molecular weight: 10661.25 Da Isoelectric Point: 5.5647
>T42070 WP_001303511.1 NZ_AP026097:2082203-2082481 [Escherichia coli]
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
MLPVLWLESADTDLDDITSYIARFDIDAAERLWQRLRGCVLPLSEHPYLYPPSDRVPGLREIVAHPNYIILYRVTTSSVE
VVNVIHARRQFP
Download Length: 279 bp
>T42070 NZ_AP026097:2082203-2082481 [Escherichia coli]
ATGTTACCCGTGTTATGGCTTGAAAGCGCAGATACCGACCTAGATGATATAACTAGTTATATTGCTCGTTTCGACATAGA
TGCGGCTGAACGCTTATGGCAGCGATTAAGGGGTTGTGTGCTGCCGTTATCCGAACATCCGTATTTATACCCACCAAGCG
ACAGAGTACCTGGCTTGCGTGAGATTGTAGCCCACCCTAACTATATAATTCTATACCGCGTAACAACATCAAGCGTTGAA
GTAGTAAACGTGATCCACGCAAGACGCCAGTTTCCCTAA
ATGTTACCCGTGTTATGGCTTGAAAGCGCAGATACCGACCTAGATGATATAACTAGTTATATTGCTCGTTTCGACATAGA
TGCGGCTGAACGCTTATGGCAGCGATTAAGGGGTTGTGTGCTGCCGTTATCCGAACATCCGTATTTATACCCACCAAGCG
ACAGAGTACCTGGCTTGCGTGAGATTGTAGCCCACCCTAACTATATAATTCTATACCGCGTAACAACATCAAGCGTTGAA
GTAGTAAACGTGATCCACGCAAGACGCCAGTTTCCCTAA
Antitoxin
Download Length: 64 a.a. Molecular weight: 7463.47 Da Isoelectric Point: 8.6828
>AT42070 WP_001302048.1 NZ_AP026097:2082010-2082201 [Escherichia coli]
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
MNRALSPMVSEFETIEQENSYNEWLRAKVATSLADPRPAIPHDEVERRMAERFAKMRKERSKQ
Download Length: 192 bp
>AT42070 NZ_AP026097:2082010-2082201 [Escherichia coli]
ATGAATAGAGCCCTTTCACCAATGGTTTCTGAATTTGAAACCATTGAACAAGAAAACAGTTACAACGAATGGCTGCGTGC
GAAAGTAGCAACGAGCCTTGCAGATCCGCGCCCAGCAATTCCCCATGACGAAGTTGAGCGCAGAATGGCAGAACGCTTTG
CTAAGATGCGCAAGGAACGGAGCAAGCAGTAA
ATGAATAGAGCCCTTTCACCAATGGTTTCTGAATTTGAAACCATTGAACAAGAAAACAGTTACAACGAATGGCTGCGTGC
GAAAGTAGCAACGAGCCTTGCAGATCCGCGCCCAGCAATTCCCCATGACGAAGTTGAGCGCAGAATGGCAGAACGCTTTG
CTAAGATGCGCAAGGAACGGAGCAAGCAGTAA
Similar Proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|