Detailed information of TA system TA040677

Bioinformatically predicted

Overview

TA module

• Type: II
• Classification (family/domain): slvAT/RES(toxin)
• Location: 2888640..2889541
• Replicon: chromosome
• Accession: NZ_AP025730
• Organism: Sphaerotilus sp. FB-5

Toxin (Protein)

• Gene name: slvT
• Uniprot ID: -
• Locus tag: NGK70_RS12560
• Protein ID: WP_251973534.1
• Coordinates: 2889041..2889541 (+)
• Length: 167 a.a.

Antitoxin (Protein)

• Gene name: slvA
• Uniprot ID: -
• Locus tag: NGK70_RS12555
• Protein ID: WP_251973533.1
• Coordinates: 2888640..2889011 (+)
• Length: 124 a.a.

Genomic Context

Locus tag	Coordinates	Strand	Size (bp)	Protein ID	Product	Description

Associated MGEs

MGE detail	Similar MGEs	Relative position	MGE Type	Cargo ARG	Virulence gene	Coordinates	Length (bp)

Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.

Domains

Predicted by InterproScan

Toxin

• RES domain (3-155)

Antitoxin

• Antitoxin Xre/MbcA/ParS-like, toxin-binding domain (70-120)

Sequences

Toxin

Protein

• Length: 167 a.a.
• Molecular weight: 18023.34 Da
• Isoelectric Point: 6.2933

>T40677 WP_251973534.1 NZ_AP025730:2889041-2889541 [Sphaerotilus sp. FB-5]
MACWRVISPAYAGTPLSGMGAARQGGRFNRPGQEALYLSLDESTALAEYRQDNPWLPAGIICTFLVRGLRVADLSARFDP
GRWPALWSDFASDWRALWFGDAIEPPTWYMADDVVAAGWDGIVFPSQARPGGRNLVIYGSSGRPATQLAVYDPTGSLARL
RSGSPS

Nucleotide

• Length: 501 bp

>T40677 NZ_AP025730:2889041-2889541 [Sphaerotilus sp. FB-5]
ATGGCCTGCTGGCGTGTCATTTCCCCCGCCTACGCGGGCACGCCCCTGTCCGGCATGGGTGCGGCGAGGCAGGGCGGGCG
GTTCAACCGGCCGGGCCAGGAGGCGCTGTACCTGTCACTGGACGAGTCCACCGCCCTGGCCGAATACCGCCAGGACAACC
CTTGGCTGCCAGCGGGCATCATATGTACCTTCCTTGTGCGGGGCCTGCGGGTGGCGGACCTGAGTGCCCGCTTCGACCCC
GGGCGCTGGCCTGCGCTGTGGAGCGACTTTGCTTCGGACTGGCGTGCTCTGTGGTTCGGCGACGCCATCGAGCCACCCAC
CTGGTACATGGCCGATGACGTTGTGGCCGCCGGGTGGGATGGCATCGTCTTCCCTTCCCAGGCGCGCCCGGGCGGCCGCA
ATCTGGTGATCTACGGCAGTTCGGGCAGGCCTGCGACGCAGTTGGCTGTCTACGACCCCACGGGCAGCCTTGCCCGCCTT
AGAAGTGGATCCCCTTCATGA

Antitoxin

Protein

• Length: 124 a.a.
• Molecular weight: 13629.55 Da
• Isoelectric Point: 8.4939

>AT40677 WP_251973533.1 NZ_AP025730:2888640-2889011 [Sphaerotilus sp. FB-5]
MSAVLKQPLVERFREPDTPYLSPTRVGDFFGFRVQELAERAHVHRNTPTARPQAPQLQKYLQDMLRVLAAATEMTGDAER
AAFLLRNEPLRAFGYKTADALVQEGRTEALIAYLQSLAGGAAG

Nucleotide

• Length: 372 bp

>AT40677 NZ_AP025730:2888640-2889011 [Sphaerotilus sp. FB-5]
ATGTCTGCCGTCCTGAAACAACCCCTTGTCGAGCGGTTCCGCGAGCCCGACACACCCTACCTGTCCCCGACGAGGGTGGG
GGACTTCTTTGGTTTTCGCGTCCAGGAACTGGCTGAGCGGGCGCATGTGCACCGCAACACACCCACTGCACGCCCGCAGG
CGCCGCAACTGCAAAAGTACCTGCAGGACATGCTGCGTGTGCTCGCCGCCGCGACGGAGATGACCGGCGATGCCGAACGC
GCCGCCTTTCTGCTGCGCAATGAGCCCCTTCGCGCCTTCGGCTACAAGACCGCCGATGCGCTTGTACAGGAGGGGCGCAC
CGAGGCGCTCATCGCCTACCTGCAGTCGTTGGCCGGCGGTGCCGCGGGATGA