Detailed information of TA system    

insolicoBioinformatically predicted

Overview

TA module


Type II Classification (family/domain) relBE/YafQ-DinJ
Location 2833379..2833907 Replicon chromosome
Accession NZ_AP025565
Organism [Clostridium] innocuum strain CE91-St51

Toxin (Protein)


Gene name relE Uniprot ID -
Locus tag MWM11_RS13675 Protein ID WP_216881149.1
Coordinates 2833629..2833907 (+) Length 93 a.a.

Antitoxin (Protein)


Gene name relB Uniprot ID -
Locus tag MWM11_RS13670 Protein ID WP_216880959.1
Coordinates 2833379..2833642 (+) Length 88 a.a.

Genomic Context

MWM11_RS13645MWM11_RS13650MWM11_RS13655MWM11_RS13660MWM11_RS13665MWM11_RS13670MWM11_RS13675MWM11_RS13685MWM11_RS13690MWM11_RS13695MWM11_RS13700MWM11_RS13705MWM11_RS13710MWM11_RS13715MWM11_RS13720MWM11_RS13680
Location: 2828652..2829656 (1005 bp)
Type: Others
Protein ID: WP_217780936.1
Location: 2829653..2830213 (561 bp)
Type: Others
Protein ID: WP_054344101.1
Location: 2830155..2830955 (801 bp)
Type: Others
Protein ID: WP_216880968.1
Location: 2830959..2832095 (1137 bp)
Type: Others
Protein ID: WP_244342800.1
Location: 2832222..2833028 (807 bp)
Type: Others
Protein ID: WP_216880961.1
Location: 2833379..2833642 (264 bp)
Type: Antitoxin
Protein ID: WP_216880959.1
Location: 2833629..2833907 (279 bp)
Type: Toxin
Protein ID: WP_216881149.1
Location: 2834336..2834551 (216 bp)
Type: Others
Protein ID: WP_216880957.1
Location: 2834605..2834907 (303 bp)
Type: Others
Protein ID: WP_216880955.1
Location: 2834919..2835176 (258 bp)
Type: Others
Protein ID: WP_216880953.1
Location: 2835226..2835615 (390 bp)
Type: Others
Protein ID: WP_216880951.1
Location: 2835612..2835824 (213 bp)
Type: Others
Protein ID: WP_216880948.1
Location: 2835953..2836111 (159 bp)
Type: Others
Protein ID: WP_216880946.1
Location: 2836309..2837598 (1290 bp)
Type: Others
Protein ID: WP_216880944.1
Location: 2838247..2838609 (363 bp)
Type: Others
Protein ID: WP_008819302.1
Location: 2833945..2834175 (231 bp)
Type: Others
Protein ID: WP_216881152.1
ToxinAntitoxinOther genes
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Locus tag
Coordinates
Strand
Size (bp)
Protein ID
Product
Description
MWM11_RS13645 (CE91St51_27780)2828652..2829656+1005WP_217780936.1M23 family metallopeptidase-
MWM11_RS13650 (CE91St51_27790)2829653..2830213+561WP_054344101.1hypothetical protein-
MWM11_RS13655 (CE91St51_27800)2830155..2830955+801WP_216880968.1hypothetical protein-
MWM11_RS13660 (CE91St51_27810)2830959..2832095+1137WP_244342800.1FtsK/SpoIIIE domain-containing protein-
MWM11_RS13665 (CE91St51_27820)2832222..2833028+807WP_216880961.1hypothetical protein-
MWM11_RS13670 (CE91St51_27830)2833379..2833642+264WP_216880959.1type II toxin-antitoxin system RelB/DinJ family antitoxinAntitoxin
MWM11_RS13675 (CE91St51_27840)2833629..2833907+279WP_216881149.1type II toxin-antitoxin system YafQ family toxinToxin
MWM11_RS13680 (CE91St51_27850)2833945..2834175-231WP_216881152.1hypothetical protein-
MWM11_RS13685 (CE91St51_27860)2834336..2834551+216WP_216880957.1hypothetical protein-
MWM11_RS13690 (CE91St51_27870)2834605..2834907+303WP_216880955.1hypothetical protein-
MWM11_RS13695 (CE91St51_27880)2834919..2835176+258WP_216880953.1hypothetical protein-
MWM11_RS13700 (CE91St51_27890)2835226..2835615+390WP_216880951.1hypothetical protein-
MWM11_RS13705 (CE91St51_27900)2835612..2835824+213WP_216880948.1hypothetical protein-
MWM11_RS13710 (CE91St51_27910)2835953..2836111+159WP_216880946.1hypothetical protein-
MWM11_RS13715 (CE91St51_27920)2836309..2837598+1290WP_216880944.1recombinase family protein-
MWM11_RS13720 (CE91St51_27930)2838247..2838609+363WP_008819302.1hypothetical protein-

Associated MGEs

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MGE
detail
Similar
MGEs
Relative
position
MGE Type
Cargo ARG
Virulence gene
Coordinates
Length (bp)
No matching records found


Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.


Domains

Predicted by InterproScan

Toxin

Toxin-antitoxin system, YafQ-like toxin

(2-92)

Antitoxin

RelB antitoxin/Antitoxin DinJ

(1-82)


Sequences

Toxin        


Download         Length: 93 a.a.        Molecular weight: 10972.87 Da        Isoelectric Point: 9.8360

>T40427 WP_216881149.1 NZ_AP025565:2833629-2833907 [[Clostridium] innocuum]
MRKIKYENSFKKDFKRIKKRGYKTEKIKAVINMLVNDIELPVEYRDHALTGKYKSRGIRECHIEPDWLLMYIKDNDELLL
ILVGTGTHSDLF

Download         Length: 279 bp

>T40427 NZ_AP025565:2833629-2833907 [[Clostridium] innocuum]
ATGAGGAAGATTAAATATGAGAATAGCTTTAAAAAGGATTTTAAGAGAATAAAGAAACGTGGCTATAAAACAGAAAAAAT
AAAAGCGGTTATCAATATGCTAGTAAATGATATTGAATTACCTGTTGAGTATCGTGACCATGCATTGACTGGCAAGTATA
AAAGCAGAGGGATTCGTGAATGTCATATTGAACCAGATTGGTTGTTAATGTATATCAAGGATAATGATGAATTATTACTA
ATATTGGTCGGGACTGGTACTCATTCAGATTTATTTTAA

Antitoxin


Download         Length: 88 a.a.        Molecular weight: 10017.24 Da        Isoelectric Point: 4.0949

>AT40427 WP_216880959.1 NZ_AP025565:2833379-2833642 [[Clostridium] innocuum]
MATISVRIDDDLKKETEEVCNELGLNMSTAVTIFLKKLCREQRIPFEVSMYNKSTTQAIENALNGMNLSKEFHNVDELFE
DLNDEED

Download         Length: 264 bp

>AT40427 NZ_AP025565:2833379-2833642 [[Clostridium] innocuum]
ATGGCAACGATAAGTGTGAGAATTGATGATGATTTAAAAAAAGAAACAGAAGAGGTATGTAATGAACTAGGTTTAAATAT
GTCAACCGCTGTAACGATTTTCCTAAAAAAATTGTGTAGAGAACAGCGTATTCCCTTTGAGGTATCAATGTATAACAAAA
GCACAACACAAGCTATAGAGAATGCTTTGAATGGAATGAATTTAAGTAAAGAGTTCCATAATGTTGATGAATTGTTTGAG
GATTTGAATGATGAGGAAGATTAA

Similar Proteins

Only experimentally validated proteins are listed.

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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found
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Protein
Organism
Identities (%)
Coverage (%)
Ha-value
No matching records found

Structures

Toxin

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Source
ID
Structure
No matching records found

Antitoxin

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Source
ID
Structure
No matching records found

References