Detailed information of TA system
Overview
TA module
| Type | II | Classification (family/domain) | tacAT/DUF1778(antitoxin) |
| Location | 841299..842080 | Replicon | chromosome |
| Accession | NZ_AP025334 | ||
| Organism | Phytobacter diazotrophicus strain TA9734 | ||
Toxin (Protein)
| Gene name | TacT2 | Uniprot ID | - |
| Locus tag | L6445_RS04005 | Protein ID | WP_125123871.1 |
| Coordinates | 841589..842080 (+) | Length | 164 a.a. |
Antitoxin (Protein)
| Gene name | TacA2 | Uniprot ID | - |
| Locus tag | L6445_RS04000 | Protein ID | WP_125123870.1 |
| Coordinates | 841299..841592 (+) | Length | 98 a.a. |
Genomic Context
Location: 838295..838435 (141 bp)
Type: Others
Protein ID: Protein_785
Type: Others
Protein ID: Protein_785
Location: 841299..841592 (294 bp)
Type: Antitoxin
Protein ID: WP_125123870.1
Type: Antitoxin
Protein ID: WP_125123870.1
Location: 841589..842080 (492 bp)
Type: Toxin
Protein ID: WP_125123871.1
Type: Toxin
Protein ID: WP_125123871.1
Location: 842145..842639 (495 bp)
Type: Others
Protein ID: WP_232034376.1
Type: Others
Protein ID: WP_232034376.1
Location: 843499..844650 (1152 bp)
Type: Others
Protein ID: Protein_791
Type: Others
Protein ID: Protein_791
Location: 838509..840698 (2190 bp)
Type: Others
Protein ID: WP_125123869.1
Type: Others
Protein ID: WP_125123869.1
Location: 842829..843344 (516 bp)
Type: Others
Protein ID: WP_125123872.1
Type: Others
Protein ID: WP_125123872.1
Location: 845060..845656 (597 bp)
Type: Others
Protein ID: WP_047749132.1
Type: Others
Protein ID: WP_047749132.1
Location: 845656..846000 (345 bp)
Type: Others
Protein ID: WP_047749131.1
Type: Others
Protein ID: WP_047749131.1
Location: 846012..846560 (549 bp)
Type: Others
Protein ID: WP_047749130.1
Type: Others
Protein ID: WP_047749130.1
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Locus tag | Coordinates | Strand | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| L6445_RS03990 (838295) | 838295..838435 | + | 141 | Protein_785 | DUF1778 domain-containing protein | - |
| L6445_RS03995 (838509) | 838509..840698 | - | 2190 | WP_125123869.1 | TonB-dependent siderophore receptor | - |
| L6445_RS04000 (841299) | 841299..841592 | + | 294 | WP_125123870.1 | DUF1778 domain-containing protein | Antitoxin |
| L6445_RS04005 (841589) | 841589..842080 | + | 492 | WP_125123871.1 | GNAT family N-acetyltransferase | Toxin |
| L6445_RS04010 (842145) | 842145..842639 | + | 495 | WP_232034376.1 | hypothetical protein | - |
| L6445_RS04015 (842829) | 842829..843344 | - | 516 | WP_125123872.1 | hypothetical protein | - |
| L6445_RS04020 (843499) | 843499..844650 | + | 1152 | Protein_791 | IS3 family transposase | - |
| L6445_RS04025 (845060) | 845060..845656 | - | 597 | WP_047749132.1 | hypothetical protein | - |
| L6445_RS04030 (845656) | 845656..846000 | - | 345 | WP_047749131.1 | hypothetical protein | - |
| L6445_RS04035 (846012) | 846012..846560 | - | 549 | WP_047749130.1 | recombinase family protein | - |
Associated MGEs
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MGE detail | Similar MGEs | Relative position | MGE Type | Cargo ARG | Virulence gene | Coordinates | Length (bp) |
|---|---|---|---|---|---|---|---|
| No matching records found | |||||||
Relative position:
(1) inside: TA loci is completely located inside the MGE;
(2) overlap: TA loci is partially overlapped with the MGE;
(3) flank: The TA loci is located in the 5 kb flanking regions of MGE.
Sequences
Toxin
Download Length: 164 a.a. Molecular weight: 17721.58 Da Isoelectric Point: 7.2655
>T40255 WP_125123871.1 NZ_AP025334:841589-842080 [Phytobacter diazotrophicus]
MISAPEPLHTGHILTPFCCGMDSMDKWLKQRAMKNQVTGASRTFVCCGSDSNVQAYYSLASSAVTTNTAPGRFRRNMPDP
IPVVVLGRLAVDQSLHGQGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLV
ESI
MISAPEPLHTGHILTPFCCGMDSMDKWLKQRAMKNQVTGASRTFVCCGSDSNVQAYYSLASSAVTTNTAPGRFRRNMPDP
IPVVVLGRLAVDQSLHGQGVGRALVRDAGLRVIQVAETIGIRGMLVHALSDEAREFYLRVGFEPSPMDPMMLMVTLGDLV
ESI
Download Length: 492 bp
>T40255 NZ_AP025334:841589-842080 [Phytobacter diazotrophicus]
ATGATCTCTGCTCCAGAACCGCTTCATACCGGGCATATTCTTACCCCGTTCTGTTGCGGCATGGATTCTATGGATAAGTG
GCTCAAACAACGGGCGATGAAAAATCAGGTCACTGGCGCATCGCGTACCTTTGTATGTTGCGGCAGCGATTCTAACGTAC
AGGCGTATTACTCGCTGGCGTCCAGCGCGGTAACGACCAACACCGCCCCCGGTCGCTTTCGTCGCAATATGCCCGATCCG
ATCCCGGTGGTGGTGCTGGGACGTCTGGCTGTGGATCAATCACTGCACGGGCAGGGCGTCGGGCGGGCGCTGGTTCGCGA
CGCCGGGCTGCGGGTTATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTGCACGCCCTGTCGGATGAAGCGC
GGGAGTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGGGGGATTTGGTG
GAGAGTATTTAG
ATGATCTCTGCTCCAGAACCGCTTCATACCGGGCATATTCTTACCCCGTTCTGTTGCGGCATGGATTCTATGGATAAGTG
GCTCAAACAACGGGCGATGAAAAATCAGGTCACTGGCGCATCGCGTACCTTTGTATGTTGCGGCAGCGATTCTAACGTAC
AGGCGTATTACTCGCTGGCGTCCAGCGCGGTAACGACCAACACCGCCCCCGGTCGCTTTCGTCGCAATATGCCCGATCCG
ATCCCGGTGGTGGTGCTGGGACGTCTGGCTGTGGATCAATCACTGCACGGGCAGGGCGTCGGGCGGGCGCTGGTTCGCGA
CGCCGGGCTGCGGGTTATTCAGGTGGCGGAGACTATCGGCATTCGCGGGATGCTGGTGCACGCCCTGTCGGATGAAGCGC
GGGAGTTTTACCTGCGGGTGGGGTTTGAGCCGTCGCCGATGGATCCGATGATGTTGATGGTGACGTTGGGGGATTTGGTG
GAGAGTATTTAG
Antitoxin
Download Length: 98 a.a. Molecular weight: 10931.55 Da Isoelectric Point: 8.6351
>AT40255 WP_125123870.1 NZ_AP025334:841299-841592 [Phytobacter diazotrophicus]
MPAANSMAMKRETLNLRIRPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYEEFLARLDQAPAPN
AALRKTMQTPAPWEQEK
MPAANSMAMKRETLNLRIRPAERDLIDRAAKARGKNRTDFVLEAARAAAEEALIEQRIIMADPQAYEEFLARLDQAPAPN
AALRKTMQTPAPWEQEK
Download Length: 294 bp
>AT40255 NZ_AP025334:841299-841592 [Phytobacter diazotrophicus]
ATGCCAGCCGCAAACAGTATGGCGATGAAACGCGAAACTCTGAATCTGCGCATCAGGCCCGCCGAGCGTGATCTTATCGA
CCGGGCAGCGAAGGCCAGAGGGAAAAACCGCACTGACTTTGTGCTGGAAGCCGCCCGCGCTGCCGCTGAGGAAGCGTTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATGAGGAGTTTCTGGCTCGTCTAGATCAGGCGCCTGCGCCTAAC
GCTGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAGCAGGAAAAATGA
ATGCCAGCCGCAAACAGTATGGCGATGAAACGCGAAACTCTGAATCTGCGCATCAGGCCCGCCGAGCGTGATCTTATCGA
CCGGGCAGCGAAGGCCAGAGGGAAAAACCGCACTGACTTTGTGCTGGAAGCCGCCCGCGCTGCCGCTGAGGAAGCGTTGA
TTGAGCAACGCATCATTATGGCCGATCCGCAGGCTTATGAGGAGTTTCTGGCTCGTCTAGATCAGGCGCCTGCGCCTAAC
GCTGCACTGCGTAAAACTATGCAGACCCCTGCGCCGTGGGAGCAGGAAAAATGA